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updated 6.2 years ago by
Laurent Gatto
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written 6.2 years ago by
cheng68
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Comment: scRNASeq reference at a transcript level
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Basti
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280
I believe this question is not related to any Bioconductor package, I think the only solution to this question is to search yourself in Pub…
Comment: Warnings when using "ashr" in lfcshrinkage for DESeq2
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andrebolerbarros
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10
Upgrading the package solved the issue, thanks!
Answer: Warnings when using "ashr" in lfcshrinkage for DESeq2
by
ATpoint
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1.2k
The error comes from the `mixsqp` package, see https://github.com/stephens999/ashr/issues/131. Upgrading the package to the most recent 0.3…
Comment: Warnings when using "ashr" in lfcshrinkage for DESeq2
by
andrebolerbarros
▴
10
Thanks for the suggestion.
I ran the following filtering criteria:
```
keep <- rowSums(counts(dds) >= 10) >= 5
dds <- dds[keep,]
```
It ga…
Comment: UniprotKB AC/ID to Entrez ID Conversion
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tom.kloter
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Hi,
I updated R, RStudio as well as the packages and now everything is working neatly! Thank you so much for your contributions to my prob…
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