Bioconductor Normqpcr

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NormqPCR EasyqpcR qPCR HTqPCR limma

updated 4.0 years ago by Ming ▴ 380 • written 4.7 years ago by enricoferrero ▴ 680

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HTqPCR R NormqPCR

6.3 years ago annesha • 0

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normqpcr selecthkgs normalization

7.7 years ago s.m.may • 0

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normqpcr deltaCq qrt-pcr

9.7 years ago jacorvar ▴ 40

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ReadqPCR NormqPCR ReadqPCR NormqPCR

updated 12.6 years ago by James Perkins ▴ 120 • written 12.6 years ago by Guest User ★ 13k

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qPCR NormqPCR qPCR NormqPCR

12.6 years ago James Perkins ▴ 120

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qPCR NormqPCR qPCR NormqPCR

12.6 years ago Guest User ★ 13k

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GO ReadqPCR NormqPCR GO ReadqPCR NormqPCR

updated 13.7 years ago by james perkins ▴ 300 • written 13.7 years ago by Pepijn Kooij ▴ 10

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Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames by ubjw24 • 0

Thank you for your replies. I got the problem solved by installing mutSignature with this line: ``` devtools::install_github("dami82/mutS…

Comment: DESeq2 design for haplotype MPRA by Rita • 0

Thank you very much, I appreciate it!

Answer: DESeq2 design for haplotype MPRA by Michael Love 43k

> My goal is to identify which non-reference haplotypes are differentially active compared to the corresponding ref/ref haplotype within ea…

Answer: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames by James W. MacDonald 68k

It seems fine on devel as well. ``` > BSgenome.Hsapiens.UCSC.hg38 | BSgenome object for Human | - organism: Homo sapiens | - provide…

Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames by James W. MacDonald 68k

R-4.5.1 is compatible with both release and devel versions of Bioconductor. Which one are you using? I am still on release, and it's fine: …

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Comment: Check removeBatchEffect effectiveness

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?

Answer: DESeq2 design for haplotype MPRA

A: Different logFC (log2foldchange) values for genes from limma-voom and other too

Comment: Check removeBatchEffect effectiveness

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