Bioconductor Rattus norvegicus

Showing : rattus norvegicus • reset

vote

1.9k

views

Gsea rattus norvegicus

updated 7.5 years ago by Gordon Smyth 53k • written 7.5 years ago by Aurora ▴ 20

vote

999

views

rattus norvegicus

updated 7.6 years ago by James W. MacDonald 68k • written 7.6 years ago by jambroise83 ▴ 10

votes

replies

1.6k

views

annotation chippeakanno rattus norvegicus medip-seq

9.7 years ago Vang Le ▴ 80

votes

replies

2.6k

views

Alignment Rattus norvegicus BSgenome BSgenome QuasR Alignment Rattus norvegicus BSgenome

updated 11.6 years ago by Hervé Pagès 16k • written 11.6 years ago by Guido Hooiveld ★ 4.1k

votes

replies

2.5k

views

Annotation GO Rattus norvegicus ChipName cdf probe affy AnnotationDbi AffyCompatible GO

updated 16.6 years ago by Groot, Philip de ▴ 630 • written 16.6 years ago by Sebastien Gerega ▴ 370

votes

replies

1.8k

views

Rattus norvegicus Rattus norvegicus

updated 17.8 years ago by Straubhaar, Juerg ▴ 300 • written 17.8 years ago by Dario Greco ▴ 310

votes

replies

2.1k

views

Rattus norvegicus Rattus norvegicus

updated 17.8 years ago by Martin Morgan 25k • written 17.8 years ago by Elliot Kleiman ▴ 150

7 results • Page 1 of 1

Recent ...

Replies

Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G by dzv20413 • 0

Wow, GBCC 2025 sounds amazing, can not wait to see the logo contest results! Also, I just played [Level Devil][1] and it is super addictive…

Comment: Memory error while running alignments by Erik Wright ▴ 150

How much memory is available on the computer? A distance matrix of 50k sequences requires at least 50k*50k/2 * 8 bytes = 10GB, assuming the…

Comment: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by Gabriel • 0

Thank you very much for the reply. However, none of these three options seems to fit: 1) The genes for which NA appears do not have all 0 …

Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames by ubjw24 • 0

Thank you for your replies. I got the problem solved by installing mutSignature with this line: ``` devtools::install_github("dami82/mutS…

Comment: DESeq2 design for haplotype MPRA by Rita • 0

Thank you very much, I appreciate it!

Votes

Comment: Check removeBatchEffect effectiveness

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?

Answer: DESeq2 design for haplotype MPRA

A: Different logFC (log2foldchange) values for genes from limma-voom and other too

Comment: Check removeBatchEffect effectiveness

Awards • All