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riboSeqR
•
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2
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3
replies
1.1k
views
Problem in reading .bam files (aligned to transcriptome) with ribofileCR function
R
riboseqr
ribosome profiling
6.3 years ago
bsad
• 0
1
vote
3
replies
1.2k
views
error in loading Riboseq
software error
riboseqr
8.6 years ago
yyu
• 0
1
vote
3
replies
1.6k
views
RiboSeqR package input file format
riboSeqR
updated 9.6 years ago by
Thomas J Hardcastle
▴ 180 • written 9.6 years ago by
Laura.Fancello
• 0
1
vote
2
replies
1.7k
views
error in frameCounting in riboSeqR
riboseqr
ribosome profiling
updated 8.2 years ago by
Thomas J Hardcastle
▴ 180 • written 8.3 years ago by
alper.celik
• 0
1
vote
0
replies
1.6k
views
Job:
PhD Student in Computational Biology
differential gene expression
rnaseq
riboseqr
computational biology
Job
8.6 years ago
Bernd Fischer
▴ 550
0
votes
0
replies
933
views
legend in plotFS
riboseqr
9.1 years ago
antonvila.s
• 0
0
votes
1
reply
1.1k
views
riboSeqR: legend in plotFS
riboseqr
updated 9.1 years ago by
Thomas J Hardcastle
▴ 180 • written 9.1 years ago by
antonvila.s
• 0
0
votes
2
replies
1.6k
views
error in callingFrames : riboSeqR
R
riboseqr
ribosome profiling
8.6 years ago
ohtack9
• 0
0
votes
3
replies
1.4k
views
Error in frameCounting using riboSeqR
riboseq
R
riboseqr
6.7 years ago
yingyingguo0228
• 0
0
votes
2
replies
933
views
aroundPromoter function in RiboSeqR gives error
riboseqr
5.6 years ago
amir.mahboubi.79
• 0
0
votes
1
reply
544
views
riboSeqR readRibodata fail in IRanges
riboSeqR
4.6 years ago
Hui.Pan
• 0
0
votes
0
replies
488
views
Reference span vs. width of read in riboseqR
riboSeqR
4.0 years ago
ni2239
• 0
0
votes
1
reply
1.2k
views
riboSeqR: criteria used to determine reading frames
riboSeqR
updated 9.2 years ago by
Thomas J Hardcastle
▴ 180 • written 9.2 years ago by
antonvila.s
• 0
0
votes
0
replies
722
views
package ‘riboSeqR’ is not available for this version of R
Bioconductor
riboSeqR
12 months ago
Javier
• 0
0
votes
1
reply
1.1k
views
riboSeqR: plotTranscript function not showing coverage
riboseqr
updated 9.2 years ago by
Thomas J Hardcastle
▴ 180 • written 9.2 years ago by
antonvila.s
• 0
0
votes
0
replies
1.3k
views
riboSeqR: interpret plots generated by plotTranscript function
riboSeqR
plotTranscript function
9.6 years ago
Laura.Fancello
• 0
0
votes
0
replies
926
views
riboSeqR: questions on plotTranscript function
riboseqr
9.2 years ago
antonvila.s
• 0
0
votes
1
reply
1.0k
views
riboSeqR: plotTranscript error
riboSeqR
updated 9.1 years ago by
Thomas J Hardcastle
▴ 180 • written 9.1 years ago by
antonvila.s
• 0
18 results • Page
1 of 1
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Comment: STRINGdb : error with string_db$plot_network()
by
ninidea
• 0
> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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Vincent J. Carey, Jr.
6.7k
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Koen Van den Berge
▴ 180
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shepherl
3.9k
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Ken C
• 0
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Johannes Rainer
★ 2.0k
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