Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
ringo
•
reset
0
votes
2
replies
1.1k
views
Nimblegen / Ringo / Preprocess error: inherits(myRG, "RGList") is not TRUE
Preprocessing
Homo sapiens
probe
Ringo
Preprocessing
Homo sapiens
probe
Ringo
14.9 years ago
JEAN-YVES SGRO
▴ 20
0
votes
4
replies
1.6k
views
Using package Ringo to analyze Agilent Chip on chip array
Ringo
Ringo
12.0 years ago
Gabriel Wajnberg
▴ 60
1
vote
2
replies
2.4k
views
making ExpressionSet from RGList via NChannelSet for use with 'sva'
biobase
convert
sva
ringo
arrayqualitymetrics
updated 8.1 years ago by
Gordon Smyth
50k • written 8.1 years ago by
chris.rock
• 0
0
votes
3
replies
1.3k
views
Error using getMeans function in Ringo/Starr
Yeast
probe
Ringo
Yeast
probe
Ringo
14.0 years ago
Noah Dowell
▴ 410
0
votes
2
replies
1.4k
views
Advice for ChIPchip-Analysis
Ringo
Ringo
14.8 years ago
Karin Zimmermann
▴ 20
0
votes
4
replies
1.4k
views
using smoothX in Ringo
probe
Ringo
probe
Ringo
updated 13.7 years ago by
Joern Toedling
▴ 450 • written 13.7 years ago by
Elizabeth Ashley
▴ 50
0
votes
2
replies
1.2k
views
Quantile normalization in Ringo package
Ringo
Ringo
updated 13.6 years ago by
Joern Toedling
▴ 450 • written 13.6 years ago by
Mohamed Lajnef
▴ 250
0
votes
2
replies
1.1k
views
Problem with Ringo
Ringo
Ringo
updated 14.8 years ago by
Wolfgang Huber
★ 13k • written 14.8 years ago by
Hari Easwaran
▴ 240
0
votes
1
reply
1.4k
views
Ringo Plots Only Partially Made
Ringo
affy
tilingarray
plot
starr
8.8 years ago
bruce.moran
▴ 30
0
votes
4
replies
1.4k
views
Ringo - finding enriched regions
Ringo
Ringo
updated 14.5 years ago by
Joern Toedling
▴ 450 • written 14.5 years ago by
Hans-Ulrich Klein
▴ 330
0
votes
1
reply
928
views
Ringo/Starr getProfiles function
biomaRt
Ringo
Starr
biomaRt
Ringo
Starr
updated 14.4 years ago by
Wolfgang Huber
★ 13k • written 14.4 years ago by
Noah Dowell
▴ 410
0
votes
1
reply
966
views
Error using Ringos readNimblegen
Ringo
Ringo
updated 15.9 years ago by
Joern Toedling
▴ 730 • written 15.9 years ago by
Morten Hansen
▴ 10
0
votes
1
reply
1.1k
views
Question about RINGO and follow up analysis
Ringo
Ringo
updated 14.3 years ago by
Joern Toedling
▴ 450 • written 14.3 years ago by
Dr. Viviana Menzel
▴ 10
0
votes
2
replies
1.1k
views
retrieveGenomicFeatureAnnotation.R file supplied with Ringo
biomaRt
Ringo
biomaRt
Ringo
updated 14.2 years ago by
Joern Toedling
▴ 450 • written 14.2 years ago by
Paul Geeleher
★ 1.3k
0
votes
2
replies
1.5k
views
Nimblegen CGH ringo to snapCGH
CGH
snapCGH
Ringo
CGH
snapCGH
Ringo
updated 14.0 years ago by
Joern Toedling
▴ 450 • written 14.0 years ago by
Chris Fenton
▴ 80
0
votes
1
reply
968
views
Ringo and dye swaps
Ringo
Ringo
updated 13.8 years ago by
Joern Toedling
▴ 450 • written 13.8 years ago by
jbethune
▴ 10
0
votes
3
replies
1.2k
views
Ringo: Error in preprocess() with R-2.7.0, but not with R-2.5.0
probe
annotate
geneplotter
affy
vsn
Ringo
probe
annotate
geneplotter
affy
vsn
Ringo
updated 15.8 years ago by
Joern Toedling
▴ 730 • written 15.8 years ago by
Ulrike Goebel
▴ 110
0
votes
1
reply
1.1k
views
Ringo for Nimblegen ChIP-chip data in GEO
Normalization
Ringo
Normalization
Ringo
updated 13.5 years ago by
Wolfgang Huber
★ 13k • written 13.6 years ago by
Yong Li
▴ 190
0
votes
2
replies
1.6k
views
Ringo install fails on R 2.8.0
Ringo
Ringo
updated 15.5 years ago by
laurent
▴ 140 • written 15.5 years ago by
Mikko Arvas
▴ 90
0
votes
1
reply
1.3k
views
vsn normalization in Ringo package
Normalization
vsn
Ringo
Normalization
vsn
Ringo
updated 9.7 years ago by
Joern Toedling
▴ 10 • written 9.8 years ago by
Guest User
★ 13k
0
votes
4
replies
1.2k
views
Two color Nucleosomes ChIP-ChIP data analysis using Ringo package.
limma
ringo
starr
8.7 years ago
ashubiochem
• 0
2
votes
1
reply
1.1k
views
Ringo File Opening Error
Ringo
updated 8.6 years ago by
Dan Tenenbaum
★ 8.2k • written 8.6 years ago by
gauravgunjal
• 0
0
votes
4
replies
1.3k
views
Missing Autocorrelation in Ringo
Annotation
Cancer
Ringo
Annotation
Cancer
Ringo
updated 14.8 years ago by
Joern Toedling
▴ 450 • written 14.8 years ago by
Torsten Waldminghaus
▴ 80
0
votes
1
reply
1.0k
views
Missing Autocorrelation in Ringo
probe
Ringo
probe
Ringo
updated 14.8 years ago by
Joern Toedling
▴ 450 • written 14.8 years ago by
Torsten Waldminghaus
▴ 80
0
votes
4
replies
1.2k
views
Ringo package: error using computeRunningMedians function
Ringo
Ringo
updated 14.7 years ago by
Joern Toedling
▴ 450 • written 14.7 years ago by
Diego Villar
▴ 40
0
votes
0
replies
1.0k
views
Ringo/Starr genomeAnno Object Tips
Annotation
biomaRt
Ringo
Annotation
biomaRt
Ringo
14.3 years ago
Noah Dowell
▴ 410
0
votes
0
replies
1.2k
views
Using Ringo
Normalization
vsn
convert
Ringo
Normalization
vsn
convert
Ringo
16.7 years ago
Joern Toedling
▴ 730
0
votes
0
replies
952
views
Ringo package: error using computeRunningMedians function
Ringo
Ringo
14.7 years ago
Joern Toedling
▴ 450
0
votes
0
replies
1.1k
views
Ringo package: biological replicate correlation within cher (chip-enriched region)
Ringo
Ringo
14.6 years ago
Diego Villar
▴ 40
0
votes
0
replies
1.1k
views
analysing NimbleGen CGH for CNV
aCGH
probe
aCGH
snapCGH
Ringo
aCGH
probe
aCGH
snapCGH
Ringo
13.4 years ago
Adeolu Adewoye
▴ 40
0
votes
0
replies
986
views
Normalizing together Nimblegen arrays with different designs
Normalization
probe
limma
Ringo
Normalization
probe
limma
Ringo
13.1 years ago
Wlasiuk Battagliotti, Gabriela - wlasiuk
▴ 20
0
votes
0
replies
944
views
using Ringo and ACME package for NimbleGen MeDIP-chip data
Ringo
ACME
Ringo
ACME
12.9 years ago
Adeolu Adewoye
▴ 40
32 results • Page
1 of 1
Recent ...
Replies
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Awards
• All
Scholar
to
James W. MacDonald
65k
Supporter
to
JKim
• 0
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Chris
• 0
Supporter
to
Jonathan
▴ 10
Locations
• All
INDIA,
4 minutes ago
France,
26 minutes ago
United States,
39 minutes ago
Australia,
45 minutes ago
Singapore,
1 hour ago
Traffic: 747 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6