Bioconductor Rnaseq

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limma limma voom rnaseq_analysis DEG

7.6 years ago • updated 6.7 years ago SPbeginner • 0

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1.8k

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rnaseq_analysis KEGG nonmodel species

updated 7.2 years ago by James W. MacDonald 68k • written 7.2 years ago by laural710 • 0

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1.2k

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sequencing rnaseq_analysis

7.8 years ago alemutak • 0

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rnaseq_analysis

8.5 years ago fakhter1 • 0

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1.4k

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rnaseq_analysis

updated 9.2 years ago by Gordon Smyth 53k • written 9.2 years ago by kjo ▴ 70

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5.4k

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deseq2 rnaseq_analysis variancestabilizingtransformation confounders

updated 9.5 years ago by Michael Love 43k • written 9.5 years ago by ompandey ▴ 10

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limma RNAseq_Analysis model.matrix

updated 10.4 years ago by Aaron Lun ★ 29k • written 10.4 years ago by anver • 0

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Answer: Alternative to BrainArray custom CDF packages for Affymetrix chips? by Guido Hooiveld ★ 4.1k

It seems that through the Internet Archive these files can be obtained: https://web.archive.org/web/20240710102334/http://brainarray.mbn…

Comment: Getting a large intercept with DESeq2 by Denise • 0

Hi, Thank you very much, James and Michael, for getting back to me! I noticed the large intercept when plotting the coefficients returned …

Comment: Error installing Seqinfo by shepherl 4.2k

Yes and we are working on getting the updated windows binaries distributed asap! We are hopeful by the end of this week

Comment: APAlyzer by shepherl 4.2k

We apologize for their unresponsiveness; you could try posting your question here to see if anyone in the community could assist in the me…

Answer: Error installing Seqinfo by fabio.marroni • 0

I am answering my own question. I found the solution thanks to [this post][1], and I am writing here the very simple procedure: 1) Instal…

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Comment: Error installing Seqinfo

Answer: replace cat with message in glmTreat when lfc = 0

Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors

Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors

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