Bioconductor Rnaseq

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limma limma voom rnaseq_analysis DEG

7.7 years ago • updated 6.8 years ago SPbeginner • 0

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1.9k

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rnaseq_analysis KEGG nonmodel species

updated 7.2 years ago by James W. MacDonald 68k • written 7.2 years ago by laural710 • 0

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1.2k

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sequencing rnaseq_analysis

7.9 years ago alemutak • 0

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rnaseq_analysis

8.5 years ago fakhter1 • 0

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rnaseq_analysis

updated 9.2 years ago by Gordon Smyth 53k • written 9.2 years ago by kjo ▴ 70

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deseq2 rnaseq_analysis variancestabilizingtransformation confounders

updated 9.6 years ago by Michael Love 43k • written 9.6 years ago by ompandey ▴ 10

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limma RNAseq_Analysis model.matrix

updated 10.5 years ago by Aaron Lun ★ 29k • written 10.5 years ago by anver • 0

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Comment: Bioinformatician at the Lausanne University Hospital by TikTsoksocissalpc • 0

Just as the Genetic Medicine Department carefully investigates rare diseases to improve patient outcomes, selecting the right Pet Treats fo…

Comment: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by TikTsoksocissalpc • 0

Normalizing complex datasets like Hi C can be challenging, much like setting up a PC for optimal gaming performance. Just as careful tuning…

Comment: p.adjust BH Question by TikTsoksocissalpc • 0

Thanks for sharing your question about RMA limma analysis While working on your experiment, it s always helpful to have some background mu…

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

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C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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