Bioconductor Rnaseq

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limma limma voom rnaseq_analysis DEG

7.1 years ago • updated 6.1 years ago SPbeginner • 0

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rnaseq_analysis KEGG nonmodel species

updated 6.6 years ago by James W. MacDonald 68k • written 6.6 years ago by laural710 • 0

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sequencing rnaseq_analysis

7.3 years ago alemutak • 0

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rnaseq_analysis

7.9 years ago fakhter1 • 0

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rnaseq_analysis

updated 8.6 years ago by Gordon Smyth 52k • written 8.6 years ago by kjo ▴ 70

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deseq2 rnaseq_analysis variancestabilizingtransformation confounders

updated 8.9 years ago by Michael Love 43k • written 8.9 years ago by ompandey ▴ 10

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limma RNAseq_Analysis model.matrix

updated 9.9 years ago by Aaron Lun ★ 28k • written 9.9 years ago by anver • 0

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Comment: Intepretation of results by Tom • 0

[Locksmith Wombwell][1] I have been interested in using AUCell as a way to determine significantly enriched pathways in my single cell spat…

Comment: Gene Ontology (GO) Analysis by Tom • 0

[Locksmith near me][1] Hello, I'm learning about Gene Ontology analysis. I'm trying to understand the difference between the hyperGTest fun…

Comment: DiffBind; Error: No sites have activity greater than filter value by etiennedanis • 0

Same issue here as well. This is very weird because I never had this issue before. I started observing this issue with a new ATAC-seq da…

Comment: GSEA preranked analysis downstream of DEseq2 by Ajay • 0

`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1] [1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/

Comment: error in ChAMP loading file by janwilseo • 0

Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)

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Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline

How to remove X & Y chromosome genes from RNAseq data

Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?

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Popular Question to Dario Strbenac ★ 1.6k