Bioconductor Rnaseqgene

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827

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rnaseqGene DESeq2 Transcriptomics

2.6 years ago • updated 11 months ago diangomaiga • 0

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819

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rnaseqGene

updated 9 months ago by Michael Love 42k • written 10 months ago by ikpa_p123 • 0

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638

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DESeq2 rnaseqGene RNASeqData limma RNASeq

updated 9 weeks ago by Michael Love 42k • written 10 weeks ago by sap275 ▴ 10

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561

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DifferentialExpression rnaseqGene RNASeqData

3 months ago Shaimaa Gamal • 0

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560

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rnaseqGene Bioconductor3.18 DifferentialExpression release

updated 6 months ago by Michael Love 42k • written 6 months ago by Nadine ▴ 60

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287

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rnaseqGene edgeR DEGraph DifferentialExpression

updated 7 weeks ago by Gordon Smyth 50k • written 7 weeks ago by z_bahari • 0

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218

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DESeq2 rnaseqGene DifferentialExpression

updated 3 months ago by Michael Love 42k • written 3 months ago by Abhishek Singh ▴ 20

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DESeq2 DifferentialExpression rnaseqGene DifferentialRegulation

updated 5 hours ago by swbarnes2 ★ 1.3k • written 14 hours ago by sajadahmad41454 • 0

8 results • Page 1 of 1

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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

> Any suggestions for methylation data segmentation? I think the same segmentation can be used.

Comment: deseq2 results by swbarnes2 ★ 1.3k

Cross-posted https://www.biostars.org/p/9594331/#9594458

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Mike Smith ★ 6.5k

The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.

Comment: Extremely small p-values using Limma for proteomic data by Robert Castelo ★ 3.3k

From the point of view of visualization, I find handy the fact that raw p-values give more resolution than adjusted ones, which allows one …

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A: Volcanoplot with limma - RAW P-values or Adj.P-Values

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: minfi latest update for EPIC V2 chip

A: Error in DESeqDataSet : some values in assay are not integers

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Teacher to Michael Love 42k