Showing : rnaseqpower • reset
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getting sample size for RNAseq experiment
rnaseqpower sspa sample size sequencing complex-design
updated 5.6 years ago by ▴ 20 • written 5.6 years ago by • 0
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3
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How to calculate coefficient of variation within group?
edgeR limma RNASeqPower
updated 6 months ago by 43k • written 6 months ago by ▴ 50
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681
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Power Calculation of multiple factors design of RNA-sequencing study
edgeR DESeq RNASeqPower edgeR DESeq RNASeqPower
7.6 years ago Guest User ★ 12k
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Depth or # of reads for RNASeqPower
rnaseqpower
6.9 years ago drnknmstrr • 0
4 results • Page 1 of 1
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Comment: How similar or disimilar are two sets of DEG? by ATpoint ▴ 850
Sounds like a job for gene set enrichment analysis, e.g. via http://bioconductor.org/packages/release/bioc/html/fgsea.html That will check…
Comment: Correct annotation of DGEList object from edgeR package regarding an RNA-Seq dat by IIart.hubII • 0
What is "coad_clear" in this case? What data have you allotted to it? Can you please share the whole code? Or can anyone answer this questi…
Comment: GenomicScores package: availableGScores and getGScores functions not working by Robert Castelo ★ 2.7k
hi, Indeed you were using an outdated version of the package. Regarding how to install current release version, please read first carefull…
Answer: Unable to install Bioconductor packages by shepherl 2.8k
This normally occurs when R was installed with a different account or an admin account. Unless on this account you won't be able to update…
Comment: GenomicScores package: availableGScores and getGScores functions not working by nattzy94 • 0
I tried to install the latest version of GenomicScores (2.4.0) by downloading the tar.gz and running `install.packages('GenomicScores_2.4.0…
Votes
A: Differential expression of RNA-seq data using limma and voom()
A: Differential expression analysis starting from TPM data
Comment: deseq2 machine sizing best practices for very large data set
Comment: Extracting normalized counts in MEDIPS
Comment: "full model matrix is less than full rank"
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