Showing : rnaseqpower • reset
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Are unequal sample sizes in differential gene expression (DGE) analysis a problem for edgeR, DESeq2, and NOISeq? Could you give me some advice on how…
RNA RNASeqPower DEGseq
written 14 months ago by • 0
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3
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featureCounts fails to load annotation file
featurecounts rnas RNASeqPower
16 months ago yasmin.hilliam ▴ 10
2
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2
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Batch adjustment for cohort based RNA seq data
RNASeqPower removeBatchEffect cpm Batcheffect
16 months ago sukeshinik5 ▴ 20
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2
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RNASeq time course analysis, missing time points for control
RNASeqData RnaSeqSampleSize RNASeq RNASeqPower
2.2 years ago drewhaydensteele • 0
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Comparing RNASeq data from multiple studies
RNASeqData RnaSeqSampleSize RNASeqPower RNASeq
updated 2.3 years ago by ▴ 780 • written 2.4 years ago by • 0
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3
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Is it okay to increase filtering to get more significant Adjusted P Values for DEGs found using Limma?
RNASeqPower edgeR DifferentialExpression limma RNASeq
updated 2.8 years ago by 53k • written 2.8 years ago by • 0
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889
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Typo in citation for RNASeqPower
RNASeqPower citation
3.6 years ago stephenjjohnson • 0
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3
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3.4k
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How to calculate coefficient of variation within group?
edgeR limma RNASeqPower
updated 4.0 years ago by 53k • written 4.9 years ago by ▴ 60
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5
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3.2k
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getting sample size for RNAseq experiment
rnaseqpower sspa sample size sequencing complex-design
updated 10.0 years ago by ▴ 20 • written 10.0 years ago by • 0
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1.6k
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Depth or # of reads for RNASeqPower
rnaseqpower
11.3 years ago drnknmstrr • 0
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1.4k
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Power Calculation of multiple factors design of RNA-sequencing study
edgeR DESeq RNASeqPower edgeR DESeq RNASeqPower
12.0 years ago Guest User ★ 13k
11 results • Page 1 of 1
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Comment: soGGi error by a2sahaaaq2c • 0
Technical discrepancies in software can be frustrating, but finding the right tools for your digital activities is key to a smooth experien…
Comment: GOseq Probability Weight Function bad fit by a2sahaaaq2c • 0
the mobile gaming world offers a different kind of strategic challenge. Many users today are shifting from heavy data processing to lighthe…
Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0
Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…
Comment: DiffBind plot.profile error by a2sahaaaq2c • 0
To resolve technical errors like installation failures or login issues, first ensure your device allows in the security settings and that…
Comment: soGGi error by shepherl 4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
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