Showing : rnaseqpower • reset
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How to calculate coefficient of variation within group?
edgeR limma RNASeqPower
updated 7 weeks ago by 42k • written 8 weeks ago by ▴ 50
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getting sample size for RNAseq experiment
rnaseqpower sspa sample size sequencing complex-design
updated 5.2 years ago by ▴ 20 • written 5.2 years ago by • 0
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674
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Depth or # of reads for RNASeqPower
rnaseqpower
6.5 years ago drnknmstrr • 0
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Power Calculation of multiple factors design of RNA-sequencing study
edgeR DESeq RNASeqPower edgeR DESeq RNASeqPower
7.2 years ago Guest User ★ 12k
4 results • Page 1 of 1
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Comment: Is there a different way to generate a tree for phyloseq object by Axel Klenk ▴ 980
1058 sounds much, much better. :-) Good to hear you got it done. Cheers, - axel
Comment: studying periodicity among small number of gene transcripts by matthew.carlucci • 0
Yes, DiscoRhythm can be used for matrices of all sizes, as long as each gene/row has enough collected data. The main `discoODAs()` ("Oscill…
Answer: Extracting the findPalindrome() results by Hervé Pagès 14k
Hi, I don't know anything about the **bios2mds** package (doesn't seem to be a Bioconductor package). Note that you don't need to turn the…
Answer: retrieve gene IDs from GO.db GO by Guido Hooiveld ★ 2.9k
A very similar question has been recently asked and answered (!) on Biostars: https://www.biostars.org/p/484651/ Please post here if it wor…
Comment: No peak corresponding to the nucleosome-free regions is observed in Fragment siz by Xiaojie Cheng • 0
Thanks a lot. As you point out, this should be a data quality issue and might have resulted from biased size selection during library prepa…
Votes
Comment: DESeq2 with high range of within-group variability
Comment: problem regarding differential gene express analysis
Comment: Normalisation in DESeq2
Answer: Compute fgsea with my own database with R version 4.0.2
Comment: lmFit, number of proteins
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