Bioconductor Shrinkage

Showing : shrinkage • reset

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3.6k

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deseq2 shrinkage

updated 3.3 years ago by Michael Love 43k • written 6.0 years ago by Nicolas Rosewick ▴ 20

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5.3k

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deseq2 betaPrior shrinkage significance

7.8 years ago brynedal ▴ 40

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1.6k

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shrinkage apeglm

3.8 years ago Frederik Ziebell ▴ 30

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1.4k

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shrinkage DifferentialExpression DESeq2

updated 2.6 years ago by ATpoint ★ 5.0k • written 2.6 years ago by Abir.khazaal ▴ 10

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1.8k

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deseq2 shrinkage

updated 7.1 years ago by Michael Love 43k • written 7.1 years ago by vvi • 0

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1.9k

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deseq2 log2fc shrinkage

updated 8.2 years ago by Michael Love 43k • written 8.2 years ago by aec ▴ 90

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336

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shrinkage DESeq2 contrast

updated 5 weeks ago by ATpoint ★ 5.0k • written 5 weeks ago by ja569116 • 0

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Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20

Thanks both for this useful information.

Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k

SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…

Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0

Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …

Answer: Issue loading and downloading Bioconductor 3.22 packages after update by strawberry3 • 0

Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …

Answer: Issue loading and downloading Bioconductor 3.22 packages after update by James W. MacDonald 68k

As Robert and ATpoint have mentioned, you need to allow more time to download a large file like this. ``` > options(timeout = 5e5) > l…

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Answer: Can sample-level weights be used when analysing GSVA scores in limma?

Comment: Can sample-level weights be used when analysing GSVA scores in limma?

Answer: Issue loading and downloading Bioconductor 3.22 packages after update

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