Showing : spatialexperiment • reset
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SingleCellExperiment convenience function for metadata+expression?
SpatialExperiment SingleCellExperiment SpatialFeatureExperiment
updated 8 days ago by ▴ 750 • written 12 days ago by • 0
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120
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cbind for multiple SpatialExperiment takes so much time
SpatialExperiment SingleCellExperiment
3 months ago Ibrahim • 0
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442
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Basic import of seqFISH from Spatial Genomics genePS into SpatialExperiment
seqFISH SpatialExperiment
6 months ago • updated 5 months ago Matthew Thornton ▴ 380
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Job: Postdoc+PhD position: Spatial & Single-Cell Computational Immunogenomics for Cancer Diagnosis
JobPosting CuratedAtlasQueryR MoleculeExperiment SingleCellExperiment SpatialExperiment
7 months ago Stefano Mangiola ▴ 20
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354
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News: Interested in the analysis of Spatial Omics data?
tidySpatialExperiment SpatialExperiment MoleculeExperiment
9 months ago info ▴ 10
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635
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Job: Bioinformatics Spatial Omics and Proteomics Postdoc (Research Officer / Senior Research Officer) at WEHI (Melbourne, Australia)
Proteomics JobPosting SingleCell Spatial SpatialExperiment
11 months ago Peter Hickey ▴ 750
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Job: Bioinformatics Spatial Omics Postdoc (Research Officer / Senior Research Officer) at WEHI (Melbourne, Australia)
SpatialExperiment JobPosting
19 months ago Peter Hickey ▴ 750
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Convert SpatialExperiment Object to Seurat Object
scuttle scater seurat SpatialExperiment
24 months ago cathalgking ▴ 10
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987
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cell_count column in SpatialExperiment Object
scuttle scater SpatialExperiment
updated 2.0 years ago by ▴ 160 • written 2.1 years ago by ▴ 10
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Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…
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Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…
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Comment: Why select top highly expressed genes based on normalized counts, but then plot by Quang NN ▴ 10
I see. Thank you ATpoint!
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Thanks James!
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