Bioconductor StageR

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2.3k

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DESeq2 stageR

19 months ago • updated 18 months ago alephreish • 0

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901

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DEXSeq stageR

2.3 years ago jbono ▴ 10

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1.0k

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stageR

updated 4.3 years ago by Koen Van den Berge ▴ 180 • written 4.3 years ago by giwa.ao • 0

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1.4k

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DRIMSeq stageR

updated 6.9 years ago by Koen Van den Berge ▴ 180 • written 6.9 years ago by sdvie • 0

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2.3k

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stageR rnaseqDTU DRIMSeq DEXSeq

7.0 years ago d-joester ▴ 20

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1.9k

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limma stageR decideTests

updated 7.1 years ago by Koen Van den Berge ▴ 180 • written 7.1 years ago by maltethodberg ▴ 180

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1.7k

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drimseq rnaseqdtu stager

updated 7.2 years ago by Michael Love 43k • written 7.2 years ago by Jack.Hearn • 0

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2.3k

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DEXSeq StageR rnaseqDTU

updated 7.3 years ago by Michael Love 43k • written 7.3 years ago by rbenel ▴ 50

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2.7k

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drimseq stageR dtu salmon rna seq

updated 7.6 years ago by Koen Van den Berge ▴ 180 • written 7.6 years ago by fiona.dick91 ▴ 60

9 results • Page 1 of 1

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Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you so much for your help! will try to proceed with the suggestion

Comment: GSEA in R/Bioconductor course by a2a2haa • 0

Academic researchers often share their breakthroughs and course updates through visual stories, making it essential to have tools that pres…

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…

Answer: Bulk RNAseq analysis for by Gordon Smyth 53k

All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…

Comment: Announcing a New Journal - Bioinformatics Methods and Applications - Now Open fo by a2a2haa • 0

By promoting reproducible analysis, the scientific community can better understand the precise mechanisms that make [Hydrogen inhalation sa…

Votes

Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

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