Bioconductor RnaseqDTU

Showing : rnaseqDTU • reset

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675

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rnaseqDTU DRIMSeq

21 months ago wangziwei0010 ▴ 10

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1.2k

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rnaseqDTU

2.1 years ago • updated 23 months ago ksong ▴ 10

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1.2k

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DEXSeq rnaseqDTU

2.7 years ago • updated 2.6 years ago rbenel ▴ 40

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1.2k

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RNA-seq DRIMSeq DEXSeq rnaseqDTU

2.7 years ago bioinformatic_trainee ▴ 10

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606

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rnaseqDTU

updated 3.5 years ago by Michael Love 41k • written 3.5 years ago by rohitsatyam102 ▴ 20

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694

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rnaseqdtu RNASeq DEXSeq DESeq2

updated 3.8 years ago by Michael Love 41k • written 3.8 years ago by debatosh das ▴ 10

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691

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rnaseqDTU

updated 3.9 years ago by Michael Love 41k • written 3.9 years ago by dixit.anirudha • 0

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827

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rnaseqDTU

updated 4.6 years ago by Michael Love 41k • written 4.6 years ago by nicog • 0

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1.2k

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rnaseqdtu

4.8 years ago rbenel ▴ 40

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1.3k

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DEXSeq DTU salmon rnaseqDTU foldchange

updated 5.0 years ago by Michael Love 41k • written 5.3 years ago by fiona.dick91 ▴ 60

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1.5k

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rnaseqDTU DRIMseq DEXseq rna-seq

5.0 years ago saddamhusain77 • 0

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2.9k

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tximport dtu salmon TPM rnaseqDTU

written 5.0 years ago by fiona.dick91 ▴ 60

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1.6k

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stageR rnaseqDTU DRIMSeq DEXSeq

5.2 years ago d-joester ▴ 20

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1.2k

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rnaseqdtu

5.2 years ago rbenel ▴ 40

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2.1k

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rnaseqDTU dtu

updated 5.3 years ago by Michael Love 41k • written 5.3 years ago by rbenel ▴ 40

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1.1k

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DTU DRIMSeq rnaseqDTU

updated 5.3 years ago by Michael Love 41k • written 5.3 years ago by fiona.dick91 ▴ 60

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1.0k

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drimseq rnaseqdtu stager

updated 5.4 years ago by Michael Love 41k • written 5.4 years ago by Jack.Hearn • 0

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1.5k

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DEXSeq StageR rnaseqDTU

updated 5.5 years ago by Michael Love 41k • written 5.5 years ago by rbenel ▴ 40

18 results • Page 1 of 1

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Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0

Thank you very much for your reply! I will do so. Kind regards, Seyram

Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0` by isaac.vock • 0

Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…

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