Bioconductor Tcga cnv

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tcga cnv gene symbol coordinate

updated 2.4 years ago by James W. MacDonald 68k • written 9.9 years ago by NS ▴ 60

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5

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TCGA CNV correlation between mRNA exprssion and CNV

updated 9.1 years ago by spulido99 • 0 • written 10.0 years ago by ycding ▴ 10

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4

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cn.mops cnvtools tcga cnv

updated 9.4 years ago by Günter Klambauer ▴ 540 • written 9.4 years ago by vakul.mohanty ▴ 20

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Comment: ComBat with repeated measures by ATpoint ★ 4.8k

It looks to me that you do not need the batch information since subject is nested with batch so correcting for subject will do a paired ana…

Comment: Surprising behavior for DEXseq dispersion estimate plot? by ATpoint ★ 4.8k

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Comment: Merging EPICV1 and V2 betas by Garbayo • 0

[BitLife][1]: Life Simulator, usually referred to as BitLife, is a mobile life simulator game created by developer CandyWriter LLC on Septe…

Comment: Package developing and interoperation with Bioconductor by shepherl 4.1k

Using an example with SummarizedExperiment would satisfy the requirement; however the package should take the object directly and not just…

Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files by Sofia • 0

1. I have tried to update the packages and R but to no avail. I keep getting either this error or : `Error in H5Fclose(file$H5Identifier) …

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Answer: Explannation for ROAST results

A: How DiffBind run PCA based on peak data?

Properly constructing a hypergeometric test

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