Showing : trackviewer • reset
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trackViewer: File format detection
trackViewer trackview
updated 5 months ago by ★ 1.2k • written 5 months ago by ▴ 10
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TrackViewer Vignette Err: attr must be a slot name of xscale object
trackViewer
16 months ago liruiradiant • 0
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trackViewer: how to make lolliplots for methylation data
trackViewer methylation lolliplot
18 months ago patriciasolesanchez • 0
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Can I use trackViewer to generate methylation lolliops with my own gene models and assembly?
trackViewer
updated 18 months ago by ★ 1.2k • written 18 months ago by • 0
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8
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trackViewer, the interactive version, can't view negative values in bigWig
trackViewer
updated 21 months ago by ★ 1.2k • written 21 months ago by • 0
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Attempts to create a lolliplot from 1000 genomes .popvcf file using trackViewer generating the error, "Error: all(width(SNP.gr[[i]]) == 1) is not TRU…
bioconductor R trackviewer
updated 3.4 years ago by ★ 1.2k • written 3.4 years ago by • 0
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trackviewer lolliplot pie.stack
lolliplot trackviewer
updated 3.9 years ago by ★ 1.2k • written 3.9 years ago by • 0
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Comment: Limma paired analysis design question by jefflincoln4 • 0
Thank you Gordon. One more thing, why use the log of blood iron concentration?
Answer: Limma paired analysis design question by Gordon Smyth 42k
Just put (log) blood iron concentration and `pair` in the design matrix. limma will work with differences automatically -- there's no need…
Comment: Extracting the findPalindrome() results by Hervé Pagès 14k
Also, you have a point: the output of `Biostrings::findPalindromes()` is an XStringViews object and `as.data.frame()` does a poor job on th…
Comment: Compute fgsea with my own database with R version 4.0.2 by assaron ▴ 190
I'm not sure what would be the best course of action in your case, if there is one at all, but I'd suggest to keep the ranking on the gene-…
Comment: Error installing Deseq2 by ATpoint ▴ 590
Go through the error logs and find the first error, this is where you have to start debugging, this here is just the consequences of the in…
Votes
Comment: DESeq2 with high range of within-group variability
Comment: problem regarding differential gene express analysis
Comment: Normalisation in DESeq2
Answer: Compute fgsea with my own database with R version 4.0.2
Comment: lmFit, number of proteins
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