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trackviewer
•
reset
4
votes
3
replies
878
views
trackviewer gi2track not found
trackv
trackViewer
2.3 years ago
tomas.rodriguez
▴ 10
3
votes
3
replies
900
views
trackViewer assigning track colors
trackViewer
track
updated 2.2 years ago by
Ou, Jianhong
★ 1.3k • written 2.2 years ago by
tomas.rodriguez
▴ 10
1
vote
3
replies
1.2k
views
trackViewer peak visualization
trackViewer
2.5 years ago
liruiradiant
• 0
1
vote
8
replies
1.6k
views
trackViewer, the interactive version, can't view negative values in bigWig
trackViewer
updated 4.7 years ago by
Ou, Jianhong
★ 1.3k • written 4.7 years ago by
liruiradiant
• 0
1
vote
3
replies
1.0k
views
trackViewer: how to make lolliplots for methylation data
trackViewer
methylation
lolliplot
4.5 years ago
patriciasolesanchez
• 0
0
votes
2
replies
1.7k
views
trackViewer bigWig smoothing
trackViewer
2.5 years ago
liruiradiant
• 0
0
votes
2
replies
965
views
trackViewer font
trackViewer
2.5 years ago
liruiradiant
• 0
0
votes
1
reply
278
views
Incorrect display of Y-axis
trackViewer
updated 5 months ago by
Ou, Jianhong
★ 1.3k • written 5 months ago by
Bastien
• 0
0
votes
1
reply
978
views
trackviewer lolliplot pie.stack
lolliplot
trackviewer
updated 6.9 years ago by
Ou, Jianhong
★ 1.3k • written 6.9 years ago by
manuel.x.duval
• 0
0
votes
0
replies
466
views
How to use xscale
trackViewer
2.0 years ago
tomas.rodriguez
▴ 10
0
votes
1
reply
962
views
Attempts to create a lolliplot from 1000 genomes .popvcf file using trackViewer generating the error, "Error: all(width(SNP.gr[[i]]) == 1) is not TRU…
bioconductor
R
trackviewer
updated 6.4 years ago by
Ou, Jianhong
★ 1.3k • written 6.4 years ago by
rop.jesse
• 0
0
votes
1
reply
629
views
Can I use trackViewer to generate methylation lolliops with my own gene models and assembly?
trackViewer
updated 4.5 years ago by
Ou, Jianhong
★ 1.3k • written 4.5 years ago by
martinson.john
• 0
0
votes
3
replies
803
views
TrackViewer Vignette Err: attr must be a slot name of xscale object
trackViewer
4.4 years ago
liruiradiant
• 0
0
votes
3
replies
769
views
trackViewer: File format detection
trackViewer
trackview
updated 3.4 years ago by
Ou, Jianhong
★ 1.3k • written 3.4 years ago by
tomas.rodriguez
▴ 10
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Comment: Why p value inconsistent when using different number of pathway score?
by
Chris
• 0
Hi Robert, if two conditions don't have hundreds of differential express genes ( in some conditions such as peripheral blood Alzheimer vs n…
Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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