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vcf
•
reset
3
votes
2
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1.7k
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VariantAnnotation package, subseting vcfs on fixed fields
variantannotation
vcf
fixed
filter
10.9 years ago
Anna N.
• 0
0
votes
1
reply
1.8k
views
readVCF (VariantAnnotation) problem with mismatched header and info fields in vcf file
annotation
vcf
readvcf
variantannotation
11.0 years ago
jls2282
• 0
0
votes
2
replies
1.6k
views
How to correct VCF Iranges from width=1 to correct end coordinate
VCF
iranges
End
software error
variantannotation
11.0 years ago
tiffanie.moss
• 0
0
votes
10
replies
3.6k
views
Incorrect row names when a VCF has multiple ALTs.
variantannotation
vcf
updated 11.1 years ago by
Valerie Obenchain
★ 6.8k • written 11.1 years ago by
bicycle1885
• 0
4
votes
3
replies
2.0k
views
how to save file on local disk after applying predictCoding() function?
vcf
predict coding
save file
VariantAnnotation
updated 11.2 years ago by
Thomas Sandmann
▴ 90 • written 11.2 years ago by
anastasiya-terskih
▴ 10
55 results • Page
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Comment: Generalized edgeR functions
by
Omar
• 0
[ragdoll hit](https://ragdollhitstickman.io/) That actually sounds like a reasonable approach, especially if the overlapping intervals repr…
Comment: upstream git branches of bioc-release
by
TrentonCollier99
• 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
by
Ahmed Salah
• 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR
by
JKim
• 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Comment: upstream git branches of bioc-release
by
Jeroen
▴ 10
OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.
Votes
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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