Showing : windows10 • reset
0
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3
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2.0k
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Failed to install 'DOSE' package. Win10, 'single candle'
DOSE package installation windows10
8.6 years ago Yisong Zhen ▴ 200
2
votes
6
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3.2k
views
Install Rsubread in win10, failed, how to proceed?
rsubread windows10 rtools
updated 6.4 years ago by ▴ 450 • written 8.6 years ago by ▴ 200
0
votes
0
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1.7k
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GO.db install fails in Windows 10 on second drive
software error GO windows10
8.9 years ago Robert Baer ▴ 70
1
vote
1
reply
3.5k
views
[Windows 10] 64. Problem installing biocLite due Warning on non writable directory
installation windows10 not-writable warning message library
10.3 years ago juancaf • 0
4 results • Page 1 of 1
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Answer: Which preprocessing steps are needed before running limpa? by Gordon Smyth 53k
It looks to me that everything is working ok and limpa has done the right thing. You data has a lot of missing values, with the proportion …
Answer: Can sample-level weights be used when analysing GSVA scores in limma? by Gordon Smyth 53k
Yes, you could probably use the voom sample weights for an analysis of the GSVA scores for the same data, although I have never tried it. …
Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Erik Wright ▴ 160
You are correct. Thank you for noticing some of this 'pollution' with "_2" suffixes was unnecessary. I posted an updated SILVA classifier …
Comment: Which preprocessing steps are needed before running limpa? by miro165sabo • 0
Hi @gordonsmyth, thank you a lot for very fast and valuable response. I edited the question to provide more details.
Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ? by Gordon Smyth 53k
I tend to use dpcCN(), because it more robust than dpc() to experiments with lots of samples and big differences between samples. You coul…
Votes
A: The meaning of results produced by the bamQC function implemented in the ATACseq
The meaning of results produced by the bamQC function implemented in the ATACseqQC
A: Reference paper or resource for limma::diffSplice and edgeR::diffSpliceDGE metho
Answer: Which preprocessing steps are needed before running limpa?
Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ?
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