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Comment:
C: Differential transcript expression (DTE) analysis
6.1 years ago
rbenel
▴ 40
0
votes
1
reply
2.8k
views
Comment:
C: Differential transcript expression (DTE) analysis
6.1 years ago
rbenel
▴ 40
0
votes
1
reply
2.8k
views
Comment:
C: Differential transcript expression (DTE) analysis
6.1 years ago
rbenel
▴ 40
0
votes
1
reply
2.8k
views
Comment:
C: Differential transcript expression (DTE) analysis
6.1 years ago
rbenel
▴ 40
3
votes
9
replies
2.8k
views
Differential transcript expression (DTE) analysis
rnaseqDTU
dtu
updated 6.1 years ago by
Michael Love
43k • written 6.1 years ago by
rbenel
▴ 40
0
votes
0
replies
2.8k
views
Comment:
C: Differential transcript expression (DTE) analysis
6.1 years ago
rbenel
▴ 40
1
vote
1
reply
1.3k
views
tximport of 3 tagged RNA-seq counts from Salmon for downstream analysis with DESeq2
tximport
deseq2
rnaseq
3' tagged RNA
updated 6.2 years ago by
Michael Love
43k • written 6.2 years ago by
rbenel
▴ 40
1
vote
0
replies
3.0k
views
Comment:
C: DESeq2 Normalized Counts for Mfuzz
6.2 years ago
rbenel
▴ 40
0
votes
1
reply
1.9k
views
Comment:
C: Plotting Expression of Differential Transcripts plotDEXseq
6.3 years ago
rbenel
▴ 40
0
votes
1
reply
1.9k
views
Comment:
C: Plotting Expression of Differential Transcripts plotDEXseq
6.3 years ago
rbenel
▴ 40
1
vote
5
replies
1.9k
views
Plotting Expression of Differential Transcripts plotDEXseq
DEXSeq
StageR
rnaseqDTU
updated 6.3 years ago by
Michael Love
43k • written 6.4 years ago by
rbenel
▴ 40
0
votes
0
replies
1.0k
views
Comment:
C: Graphically Represent p-values from plot_annot_score in package GOfuncR
6.4 years ago
rbenel
▴ 40
0
votes
2
replies
1.0k
views
Graphically Represent p-values from plot_annot_score in package GOfuncR
GOfuncR
plot_anno_scores
plot_stats
updated 6.4 years ago by
steffi_grote
• 0 • written 6.4 years ago by
rbenel
▴ 40
0
votes
0
replies
13k
views
Comment:
C: Constructing tx2gene for Salmon txImport Quantification using Gencode Mouse Tran
6.6 years ago
rbenel
▴ 40
0
votes
1
reply
13k
views
Comment:
C: Constructing tx2gene for Salmon txImport Quantification using Gencode Mouse Tran
6.6 years ago
rbenel
▴ 40
0
votes
1
reply
13k
views
Comment:
C: Constructing tx2gene for Salmon txImport Quantification using Gencode Mouse Tran
updated 6.6 years ago by
Michael Love
43k • written 6.6 years ago by
rbenel
▴ 40
1
vote
1
reply
3.0k
views
Comment:
C: DESeq2 Normalized Counts for Mfuzz
6.6 years ago
rbenel
▴ 40
0
votes
2
replies
3.0k
views
Comment:
C: DESeq2 Normalized Counts for Mfuzz
6.6 years ago
rbenel
▴ 40
0
votes
1
reply
3.0k
views
Comment:
C: DESeq2 Normalized Counts for Mfuzz
6.6 years ago
rbenel
▴ 40
3
votes
9
replies
3.0k
views
DESeq2 Normalized Counts for Mfuzz
deseq2
rnaseq
mfuzz
updated 6.6 years ago by
Michael Love
43k • written 6.6 years ago by
rbenel
▴ 40
0
votes
1
reply
2.7k
views
Comment:
C: Visualization for Time Course "LRT" test in DESeq2
6.6 years ago
rbenel
▴ 40
0
votes
0
replies
1.5k
views
Comment:
C: Error in Apeglm Method for Effect Size Shrinkage
6.6 years ago
rbenel
▴ 40
0
votes
1
reply
1.5k
views
Comment:
C: Error in Apeglm Method for Effect Size Shrinkage
6.6 years ago
rbenel
▴ 40
0
votes
4
replies
1.5k
views
Error in Apeglm Method for Effect Size Shrinkage
deseq2
apeglm
updated 6.6 years ago by
Michael Love
43k • written 6.6 years ago by
rbenel
▴ 40
0
votes
1
reply
2.7k
views
Comment:
C: Visualization for Time Course "LRT" test in DESeq2
6.7 years ago
rbenel
▴ 40
0
votes
1
reply
2.7k
views
Comment:
C: Visualization for Time Course "LRT" test in DESeq2
6.7 years ago
rbenel
▴ 40
1
vote
7
replies
2.7k
views
Visualization for Time Course "LRT" test in DESeq2
deseq2
time-course
updated 6.7 years ago by
Michael Love
43k • written 6.7 years ago by
rbenel
▴ 40
0
votes
1
reply
3.5k
views
Comment:
C: ensembldb error/bug: Can't locate Bio/EnsEMBL/ApiVersion.pm in @INC | fetchTable
6.7 years ago
rbenel
▴ 40
0
votes
1
reply
3.5k
views
Comment:
C: ensembldb error/bug: Can't locate Bio/EnsEMBL/ApiVersion.pm in @INC | fetchTable
6.7 years ago
rbenel
▴ 40
0
votes
1
reply
3.5k
views
Comment:
C: ensembldb error/bug: Can't locate Bio/EnsEMBL/ApiVersion.pm in @INC | fetchTable
6.7 years ago
rbenel
▴ 40
0
votes
1
reply
1.8k
views
Comment:
C: Downstream analysis for Salmon output: IsoformSwitchAnalyzeR or TSIS?
6.8 years ago
rbenel
▴ 40
0
votes
3
replies
1.8k
views
Downstream analysis for Salmon output: IsoformSwitchAnalyzeR or TSIS?
isoforms
diffrential expression
noncoding rna
TSIS
isoformswitchanalyzeR
6.8 years ago
rbenel
▴ 40
0
votes
1
reply
3.5k
views
Comment:
C: ensembldb error/bug: Can't locate Bio/EnsEMBL/ApiVersion.pm in @INC | fetchTable
6.8 years ago
rbenel
▴ 40
0
votes
1
reply
3.5k
views
Comment:
C: ensembldb error/bug: Can't locate Bio/EnsEMBL/ApiVersion.pm in @INC | fetchTable
6.8 years ago
rbenel
▴ 40
0
votes
0
replies
1.1k
views
Comment:
C: Chromosme Name: "CHR_HSCHR19..."
6.9 years ago
rbenel
▴ 40
0
votes
2
replies
1.1k
views
Chromosme Name: "CHR_HSCHR19..."
biomart
ensembl
grch38
6.9 years ago
rbenel
▴ 40
0
votes
1
reply
4.4k
views
Comment:
C: Scan error using biomart with version option
6.9 years ago
rbenel
▴ 40
0
votes
0
replies
2.3k
views
Comment:
C: Extract genomic features from a TxDb-like object
6.9 years ago
rbenel
▴ 40
0
votes
1
reply
2.3k
views
Comment:
C: Extract genomic features from a TxDb-like object
6.9 years ago
rbenel
▴ 40
1
vote
5
replies
2.3k
views
Extract genomic features from a TxDb-like object
TxDB
genomicfeatures
promoter
getpromoterseq
updated 7.0 years ago by
Hervé Pagès
16k • written 7.0 years ago by
rbenel
▴ 40
0
votes
0
replies
2.3k
views
Comment:
C: Extract genomic features from a TxDb-like object
7.0 years ago
rbenel
▴ 40
0
votes
0
replies
6.9k
views
Comment:
C: unable to update mgcv package
7.5 years ago
rbenel
▴ 40
0
votes
1
reply
6.9k
views
Comment:
C: unable to update mgcv package
7.6 years ago
rbenel
▴ 40
0
votes
1
reply
6.9k
views
Comment:
C: unable to update mgcv package
7.6 years ago
rbenel
▴ 40
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