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8
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6
replies
6.2k
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Using the plotting functions of clusterProfiler / enrichplot with enrichment results from other programs
clusterProfiler enrichplot
updated 7 months ago by ▴ 30 • written 5.6 years ago by ▴ 160
1
vote
2
replies
2.9k
views
Properly constructing a hypergeometric test
overrepresentation overlap R hypergeometric
updated 2.2 years ago by ★ 4.6k • written 2.2 years ago by ▴ 160
0
votes
1
reply
3.1k
views
Answer: Answer: ENSEMBL to gene symbol
2.5 years ago charles.foster ▴ 160
0
votes
1
reply
6.2k
views
Comment: Comment: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
2.5 years ago charles.foster ▴ 160
0
votes
0
replies
6.2k
views
Comment: Comment: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
3.7 years ago charles.foster ▴ 160
3
votes
1
reply
1.3k
views
Obtain p-values for group * condition interaction using DESeq2?
DESeq2 interaction differential expression
updated 4.5 years ago by 43k • written 4.5 years ago by ▴ 160
3
votes
3
replies
2.3k
views
Best way to include RIN in differential expression design
deseq2 limma
updated 4.7 years ago by ★ 3.4k • written 4.7 years ago by ▴ 160
0
votes
0
replies
2.3k
views
Comment: C: Best way to include RIN in differential expression design
4.7 years ago charles.foster ▴ 160
0
votes
0
replies
5.7k
views
Comment: C: Subset WGCNA results for export to Cytoscape
5.2 years ago charles.foster ▴ 160
0
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0
replies
5.7k
views
Comment: C: Subset WGCNA results for export to Cytoscape
5.2 years ago charles.foster ▴ 160
8
votes
6
replies
5.7k
views
Subset WGCNA results for export to Cytoscape
wgcna
updated 5.2 years ago by ★ 3.0k • written 5.2 years ago by ▴ 160
0
votes
1
reply
5.7k
views
Comment: C: Subset WGCNA results for export to Cytoscape
5.2 years ago charles.foster ▴ 160
0
votes
0
replies
6.9k
views
Comment: C: WGCNA sample size minimum: why?
5.4 years ago charles.foster ▴ 160
7
votes
4
replies
6.9k
views
WGCNA sample size minimum: why?
wgcna
updated 5 months ago by • 0 • written 5.4 years ago by ▴ 160
5
votes
2
replies
6.2k
views
Answer: A: Using the plotting functions of clusterProfiler / enrichplot with enrichment res
5.6 years ago charles.foster ▴ 160
2
votes
1
reply
1.8k
views
GOseq analysis with only upregulated or downregulated genes
goseq
updated 5.7 years ago by ▴ 320 • written 5.7 years ago by ▴ 160
1
vote
1
reply
984
views
Finding genes that are expressed only in one condition within a contrast
filter deseq2
updated 5.8 years ago by 43k • written 5.8 years ago by ▴ 160
0
votes
0
replies
2.9k
views
Comment: C: Interpreting the results from lfcShrink() with apeglm in DESeq2
6.2 years ago charles.foster ▴ 160
4
votes
2
replies
2.9k
views
Interpreting the results from lfcShrink() with apeglm in DESeq2
deseq2 apeglm lfcshrink
updated 6.2 years ago by 43k • written 6.2 years ago by ▴ 160
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