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biomart not ound some prevous release
biomart rnaseq
updated 4.8 years ago by ★ 6.2k • written 4.8 years ago by ▴ 40
2
votes
1
reply
1.9k
views
TCGA biomart conversion
biomart
updated 5.5 years ago by ★ 6.2k • written 5.5 years ago by ▴ 40
0
votes
1
reply
541
views
GenomicDatacommon execution error
GenomicDatacommon
5.5 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
613
views
Biomart expection using values filter
biomart
updated 5.6 years ago by ★ 6.2k • written 5.6 years ago by ▴ 40
0
votes
0
replies
485
views
Maftotols importer error
maftols
5.6 years ago jarod_v6@libero.it ▴ 40
0
votes
0
replies
964
views
problem on getpromoters on hg38
chipseeker ChIPseeker
5.8 years ago jarod_v6@libero.it ▴ 40
0
votes
0
replies
1.7k
views
Comment: C: Deseq2 padj value very low
5.8 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
1.7k
views
Comment: C: Deseq2 padj value very low
5.8 years ago jarod_v6@libero.it ▴ 40
0
votes
4
replies
1.7k
views
Deseq2 padj value very low
deseq2
updated 5.8 years ago by 41k • written 5.8 years ago by ▴ 40
0
votes
9
replies
3.3k
views
Upgrade bioconductor 3.2 to 3.3
bioclIte tximportData
updated 5.9 years ago by ▴ 80 • written 7.5 years ago by ▴ 40
0
votes
0
replies
599
views
Rippseeker problem with allocate space
RIP ripseek ripseeker
5.9 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
646
views
Problem on tximport kallisto
tximport
updated 6.2 years ago by 41k • written 6.2 years ago by ▴ 40
0
votes
0
replies
1.7k
views
Comment: C: Different results obtained from mroast and camera from Deseq2 counts
6.4 years ago jarod_v6@libero.it ▴ 40
0
votes
6
replies
1.7k
views
Different results obtained from mroast and camera from Deseq2 counts
limma camera mroast tximport
updated 6.5 years ago by 64k • written 6.5 years ago by ▴ 40
0
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0
replies
1.7k
views
Comment: C: Different results obtained from mroast and camera from Deseq2 counts
6.5 years ago jarod_v6@libero.it ▴ 40
0
votes
0
replies
1.7k
views
Comment: C: Different results obtained from mroast and camera from Deseq2 counts
6.5 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
881
views
Comment: C: how to apply correctly geneSetTest on deseq2 data results
6.5 years ago jarod_v6@libero.it ▴ 40
0
votes
3
replies
881
views
how to apply correctly geneSetTest on deseq2 data results
deseq2 limma
updated 6.5 years ago by 41k • written 6.5 years ago by ▴ 40
0
votes
1
reply
2.0k
views
Unsupervised heatmap use tpm or rlog gave different results
deseq2 tpm heatmap pheatmap
updated 6.5 years ago by 41k • written 6.5 years ago by ▴ 40
0
votes
1
reply
735
views
Biomart error on association gene symbols name
biomart deseq2
updated 6.5 years ago by 64k • written 6.5 years ago by ▴ 40
0
votes
2
replies
1.3k
views
Txtimport for kallisto on hg38 v87
txtimport deseq2 ensembl release
updated 6.7 years ago by 64k • written 6.7 years ago by ▴ 40
0
votes
1
reply
1.3k
views
Comment: C: deseq2 strange error: high number of diffferential genes
6.8 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
1.3k
views
Comment: C: deseq2 strange error: high number of diffferential genes
6.8 years ago jarod_v6@libero.it ▴ 40
0
votes
9
replies
1.3k
views
deseq2 strange error: high number of diffferential genes
deseq2
updated 6.8 years ago by 41k • written 6.8 years ago by ▴ 40
0
votes
0
replies
1.3k
views
Comment: C: deseq2 strange error: high number of diffferential genes
6.8 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
1.3k
views
Comment: A: deseq2 strange error: high number of diffferential genes
6.8 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
1.0k
views
annotation of agillent array G3 Human Gene Expression v3 8x50
microarray annotation agilent
updated 6.9 years ago by 64k • written 6.9 years ago by ▴ 40
1
vote
0
replies
2.2k
views
Comment: C: Error on creation of DESEq2 object
7.0 years ago jarod_v6@libero.it ▴ 40
1
vote
4
replies
2.2k
views
Error on creation of DESEq2 object
deseq2 tcga
updated 7.0 years ago by 41k • written 7.0 years ago by ▴ 40
0
votes
0
replies
2.2k
views
Comment: C: Error on creation of DESEq2 object
7.0 years ago jarod_v6@libero.it ▴ 40
1
vote
1
reply
1.8k
views
Install problems on centos 7 of TCGAbiolinks
tcgabiolinks centos7
updated 7.1 years ago by ★ 6.2k • written 7.1 years ago by ▴ 40
0
votes
1
reply
600
views
rlog trasformation on 1098 samples
deseq2
updated 7.1 years ago by 41k • written 7.1 years ago by ▴ 40
0
votes
1
reply
1.6k
views
Comment: C: PCA results different from th same sample but different counting method
7.1 years ago jarod_v6@libero.it ▴ 40
1
vote
1
reply
657
views
deseq2 rlog trasformation
deseq2 rlog transformation
updated 7.1 years ago by 41k • written 7.1 years ago by ▴ 40
0
votes
0
replies
6.2k
views
Pheatmap: how to use breaks for pheatmap
pheatmap heatmap
7.1 years ago jarod_v6@libero.it ▴ 40
2
votes
1
reply
3.5k
views
Deseq2 use fpkm
deseq2
updated 7.2 years ago by 41k • written 7.2 years ago by ▴ 40
0
votes
1
reply
1.6k
views
Comment: C: PCA results different from th same sample but different counting method
7.4 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
1.6k
views
Comment: C: PCA results different from th same sample but different counting method
7.4 years ago jarod_v6@libero.it ▴ 40
0
votes
7
replies
1.6k
views
PCA results different from th same sample but different counting method
deseq2 pca tximportdata htseqcounts
updated 7.4 years ago by 41k • written 7.4 years ago by ▴ 40
4
votes
3
replies
4.0k
views
txtimportData installation on R version 3.3.0 (2016-05-03)
tximport deseq2
7.5 years ago jarod_v6@libero.it ▴ 40
1
vote
1
reply
4.0k
views
Answer: A: txtimportData installation on R version 3.3.0 (2016-05-03)
7.5 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
3.3k
views
Comment: C: Upgrade bioconductor 3.2 to 3.3
7.5 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
3.3k
views
Comment: C: Upgrade bioconductor 3.2 to 3.3
7.5 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
3.3k
views
Comment: C: Upgrade bioconductor 3.2 to 3.3
7.5 years ago jarod_v6@libero.it ▴ 40
0
votes
2
replies
1.5k
views
Unsupervised analysis problems
pheatmap unsupervised
updated 7.8 years ago by 41k • written 7.8 years ago by ▴ 40
0
votes
1
reply
3.8k
views
Answer: A: Deseq2 unsupervised analysis (heatmap row scaling or none?)
7.8 years ago jarod_v6@libero.it ▴ 40
4
votes
5
replies
3.8k
views
Deseq2 unsupervised analysis (heatmap row scaling or none?)
deseq2 pheatmap
7.9 years ago • updated 7.8 years ago jarod_v6@libero.it ▴ 40
0
votes
0
replies
3.8k
views
Comment: C: Deseq2 unsupervised analysis (heatmap row scaling or none?)
7.8 years ago jarod_v6@libero.it ▴ 40
0
votes
1
reply
2.9k
views
Comment: C: DESeq2 filter out my expression gene
7.8 years ago jarod_v6@libero.it ▴ 40
0
votes
2
replies
2.9k
views
Comment: C: DESeq2 filter out my expression gene
7.8 years ago jarod_v6@libero.it ▴ 40
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