0
votes
3
replies
1.3k
views
beyond gene differential expression
12.8 years ago wang peter ★ 2.0k
0
votes
2
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2.9k
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[R] Select single probe-set with median expression from multiple probe-sets corresponding to same gene -AFFY
GO probe Biobase genefilter GO probe Biobase genefilter
updated 12.8 years ago by 25k • written 12.8 years ago by ▴ 30
0
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1
reply
1.2k
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Limma linear models
Annotation limma Annotation limma
updated 12.8 years ago by ▴ 120 • written 12.8 years ago by ▴ 50
0
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0
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1.8k
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gmapR for R 3.0.0 installation problem?
gmapR gmapR
12.8 years ago Dan Tenenbaum ★ 8.2k
0
votes
7
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2.3k
views
Fwd: GO terms: Annotation for HumanMethylation450
Annotation Pathways GO probe annotate Annotation Pathways GO probe annotate
12.8 years ago Jinyan Huang ▴ 110
0
votes
1
reply
979
views
FW: Join us for a two-day R workshop featuring bioinformatics with Bioconductor & seamless R/C++ integration.
Genetics Genetics
12.8 years ago Sparapani, Rodney ▴ 20
0
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3
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1.6k
views
logFC in GLM of egdeR
edgeR edgeR
updated 12.8 years ago by 53k • written 12.8 years ago by ▴ 30
0
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2
replies
1.3k
views
Fwd: GO terms: Annotation for HumanMethylation450
Annotation Pathways GO probe annotate Annotation Pathways GO probe annotate
updated 12.8 years ago by ▴ 110 • written 12.8 years ago by ★ 4.2k
0
votes
1
reply
1.4k
views
MEDIPS
Sequencing Alignment MEDIPS Sequencing Alignment MEDIPS
updated 12.8 years ago by ▴ 570 • written 12.8 years ago by ▴ 350
0
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2
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1.2k
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Mus.musculus package pdf not found
updated 12.8 years ago by ★ 8.2k • written 12.8 years ago by ▴ 150
0
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0
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1.3k
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Pathview package for pathway based data integration and visualization
Visualization pathview Visualization pathview
12.8 years ago Luo Weijun ★ 1.6k
0
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1
reply
1.5k
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fRMA for Gene ST arrays
affy oligo frma ASSIGN affy oligo frma ASSIGN
updated 12.8 years ago by ▴ 830 • written 12.8 years ago by ▴ 100
3
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1
reply
1.5k
views
Mass spectrometry data analysis
updated 12.8 years ago by ★ 13k • written 12.8 years ago by 68k
0
votes
4
replies
1.6k
views
GO terms: Annotation for HumanMethylation450
Annotation Pathways GO probe Annotation Pathways GO probe
updated 12.8 years ago by ▴ 110 • written 12.8 years ago by ★ 7.2k
0
votes
0
replies
1.3k
views
Regarding Illumina's WG-DASL.
12.8 years ago abdul rawoof ▴ 60
0
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0
replies
1.1k
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subscript out of bounds in makeAnnDbPkg function
Annotation Annotation
12.8 years ago Marc Carlson ★ 7.2k
0
votes
0
replies
1.3k
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DEXSeq html report error
puma DEXSeq puma DEXSeq
12.8 years ago Natasha ▴ 440
0
votes
1
reply
2.4k
views
using offsets from EDASeq and cqn for edgeR
GO edgeR cqn EDASeq GO edgeR cqn EDASeq
12.8 years ago Kasper Daniel Hansen ★ 6.5k
0
votes
3
replies
2.9k
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known gene => gene symbol for UCSC
GO GO
updated 12.8 years ago by 68k • written 12.8 years ago by ▴ 150
0
votes
1
reply
880
views
exonsBy order
updated 12.8 years ago by ★ 6.8k • written 12.8 years ago by ▴ 150
0
votes
0
replies
1.3k
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faillure in ragene10stv1 in rat Gene St0.1 Affymetrix data
Annotation affy oligo xps Annotation affy oligo xps
12.8 years ago James W. MacDonald 68k
0
votes
1
reply
873
views
faillure in ragene10stv1 in rat Gene St0.1 Affymetrix data
Annotation Annotation
updated 12.8 years ago by 68k • written 12.8 years ago by ★ 13k
0
votes
2
replies
1.9k
views
Limit on number of sequence files for forging a BSgenome
GO Cancer BSgenome BSgenome genomes GO Cancer BSgenome BSgenome genomes
12.8 years ago Hervé Pagès 16k
0
votes
1
reply
2.1k
views
nsfilter error from expressionset obtained after using aroma for processing
Annotation Preprocessing hgu95av2 limma Annotation Preprocessing hgu95av2 limma
updated 12.8 years ago by ★ 13k • written 12.8 years ago by ▴ 810
0
votes
4
replies
9.9k
views
rtracklayer importing gtf files
rtracklayer DESeq GenomicRanges rtracklayer DESeq GenomicRanges
updated 12.8 years ago by ★ 11k • written 12.8 years ago by ★ 13k
0
votes
0
replies
1.7k
views
identifying drosophila miRNA targets
miRNA drosophila2 probe affy convert affycoretools microRNA miRNA drosophila2 probe affy
12.8 years ago Fiona ▴ 70
0
votes
0
replies
784
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RNASeqPower
12.8 years ago Hart, Steven N., Ph.D. ▴ 10
0
votes
1
reply
1.7k
views
xps- not being able to load it
xps xps
updated 12.8 years ago by ★ 3.9k • written 12.8 years ago by ▴ 810
0
votes
1
reply
1.6k
views
[Rd] R/Sweave/cairo/freetype bug fix.
Category Category
updated 12.8 years ago by ▴ 60 • written 12.8 years ago by ▴ 30
0
votes
0
replies
714
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list submission
Vega Vega
12.8 years ago Edmundo Vega ▴ 10
0
votes
0
replies
3.2k
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subscript out of bounds in makeAnnDbPkg function
Annotation Annotation
12.8 years ago wang peter ★ 2.0k
0
votes
0
replies
556
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.::Gregory Gentlemen::.
12.8 years ago Gregory Gentlemen ▴ 20
0
votes
0
replies
2.0k
views
Bioconductor Digest, Vol 121, Issue 29
miRNA Annotation Normalization Visualization Clustering Infrastructure Cancer BSgenome vsn
12.8 years ago Matthew Thornton ▴ 390
0
votes
2
replies
1.9k
views
rGADEM crash
rGADEM rGADEM
12.8 years ago Lakshmanan Iyer ▴ 50
0
votes
2
replies
1.6k
views
ChIPpeakAnno
annotate ChIPpeakAnno annotate ChIPpeakAnno
12.8 years ago Julie Zhu ★ 4.3k
0
votes
0
replies
1.1k
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Problems in running easyRNASeq
Annotation BSgenome BSgenome Annotation BSgenome BSgenome
12.8 years ago pepap ▴ 10
0
votes
0
replies
2.8k
views
diffbind
convert DiffBind convert DiffBind
12.8 years ago Rory Stark ★ 5.2k
0
votes
1
reply
878
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simple ggplot
updated 12.8 years ago by 21k • written 12.8 years ago by ★ 13k
0
votes
2
replies
2.1k
views
Interpreting DESeq2 results
updated 12.8 years ago by 43k • written 12.8 years ago by ▴ 420
0
votes
0
replies
1.2k
views
analysis of HuGene2.0-st array affymetrix -aroma package
genefilter genefilter
12.8 years ago Andreia Fonseca ▴ 810
0
votes
4
replies
1.6k
views
identifying drosophila miRNA targets
miRNA affy microRNA miRNA affy microRNA
updated 12.8 years ago by 68k • written 12.8 years ago by ▴ 70
0
votes
2
replies
3.1k
views
[R] Error in setMethod("combine"... was - Error when installing globaltest package
Infrastructure Cancer Biobase tkWidgets globaltest BiocInstaller BiocGenerics Cancer
updated 12.8 years ago by 25k • written 12.8 years ago by ▴ 40
0
votes
6
replies
2.2k
views
Heatmaps for Agilent Single Color 4x44k using limma and vsn.
Annotation Normalization vsn limma Annotation Normalization vsn limma
updated 12.8 years ago by 68k • written 12.8 years ago by ▴ 50
0
votes
2
replies
2.3k
views
shared object ‘mzR.so’ not found after mzR update
mzR mzR
updated 12.8 years ago by ★ 13k • written 12.8 years ago by ▴ 20
3
votes
4
replies
1.7k
views
Limit on number of sequence files for forging a BSgenome
BSgenome BSgenome genomes BSgenome BSgenome genomes
updated 12.8 years ago by ★ 6.5k • written 12.8 years ago by ▴ 220
0
votes
6
replies
2.2k
views
barcode with custom CDF
cdf frma frmaTools cdf frma frmaTools
updated 12.8 years ago by ▴ 600 • written 12.8 years ago by ★ 13k
0
votes
0
replies
1.0k
views
Exon Arrays - GC & how many pm features?
oligo oligo
12.8 years ago Jonathan Cairns ▴ 60
0
votes
0
replies
1.6k
views
Job: Bioinformatician (postdoc, indefinite) Pirbright Institute
Infrastructure Infrastructure
12.8 years ago Jan T Kim ▴ 50
0
votes
6
replies
2.1k
views
BED2RangedData
GO convert GO convert
updated 12.8 years ago by ▴ 40 • written 12.8 years ago by ★ 13k
0
votes
2
replies
1.2k
views
BSgenome.Dmelanogaster.UCSC.dm3 package for R 3.0.0 beta?
BSgenome BSgenome BSgenome BSgenome
updated 12.8 years ago by 68k • written 12.8 years ago by ▴ 340
46,712 results • Page 547 of 935
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Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0
Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…
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Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!
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Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…
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Thank you @seandavi for your feedback. I followed your recommendations and generated a [pull request][1] including the fix for this issue…
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Answer: Where do the filename come from in the LOLA datasets?
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