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15.8 years ago Radek Blatny ▴ 60
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Using RMA normalization on 3 microarray replicates - valid?
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15.8 years ago sue@xlsolutions-corp.com ▴ 570
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Time-course microarray tutorial
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question regarding qc function in simpleaffy package
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15.8 years ago Groot, Philip de ▴ 630
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updated 15.8 years ago by 21k • written 15.8 years ago by ▴ 220
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Get gene expression data by averaging probes corresponding to the gene?
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15.8 years ago Arun A K ▴ 20
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15.8 years ago Chintanu ▴ 310
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15.8 years ago HU,ZHENGJUN ▴ 20
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15.8 years ago Maxim ▴ 170
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updated 15.8 years ago by ★ 13k • written 15.8 years ago by ▴ 840
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updated 15.8 years ago by 68k • written 15.8 years ago by ▴ 20
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readMicroRnaAFE function in AgiMicroR package
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filtering in GSEABase package
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updated 15.8 years ago by ▴ 610 • written 15.8 years ago by ▴ 190
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Problem in running expresso command in affy package
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KEGGgraph: retrieveKGML error (due to wrong ftp path)
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updated 15.8 years ago by ▴ 370 • written 15.8 years ago by ▴ 80
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15.8 years ago Groot, Philip de ▴ 630
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Problem in running affy package
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updated 15.8 years ago by ▴ 580 • written 15.9 years ago by ▴ 20
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error in gene2pathway results
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updated 15.8 years ago by ★ 7.2k • written 15.8 years ago by ▴ 420
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15.8 years ago Perry_D_Haaland@bd.com ▴ 50
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Count differences between sequences
15.9 years ago • updated 15.8 years ago erikwright@comcast.net ▴ 20
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updated 15.9 years ago by ★ 7.4k • written 15.9 years ago by ▴ 40
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spillover method in flowCore package
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How to create a design matrix for a three-way design?
updated 15.9 years ago by 68k • written 15.9 years ago by ▴ 370
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Limma: technical replicates in multi-group design
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updated 15.9 years ago by ★ 3.6k • written 15.9 years ago by ▴ 50
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how to generate a data frame containing all the coefficients of the different contrasts, the p-value and the adjusted p-value ?
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updated 15.9 years ago by 21k • written 15.9 years ago by ▴ 100
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Question about plateCore
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updated 15.9 years ago by ▴ 40 • written 15.9 years ago by ▴ 70
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15.9 years ago Julie Zhu ★ 4.3k
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Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0
Thank you!
Comment: AnnotationForge makeOrgPackage rsqlite_send_query error by ansley.r.burtch • 0
Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …
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I prefer for limpa to work on precursor intensities, because my understanding is that precursors are the basic unit of identification and q…
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As long as OpenStats is building cleanly and all needed stated dependencies are on CRAN or Bioconductor, OpenStats will not be archived. I…
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Yes, I find that the LFC shrinkage and its corresponding stat `svalue` if you use lfcShrink with a threshold often returns more reliable ge…
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