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0
replies
1.2k
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RE: Design matrix with multiple genotypes + quantified variables (+cor/regression)
Regression
limma
Regression
limma
21.4 years ago
Matthew Hannah
▴ 940
0
votes
0
replies
737
views
AffyPLM can detect poor labelling on test chips
affy
affy
21.4 years ago
Matthew Hannah
▴ 940
0
votes
2
replies
1.5k
views
simpleaffy problem
probe
simpleaffy
probe
simpleaffy
updated 21.4 years ago by
Crispin Miller
★ 1.1k • written 21.4 years ago by
Ariel Chernomoretz
▴ 380
0
votes
0
replies
1.0k
views
Limma and Benjamini FDR
Microarray
limma
Microarray
limma
21.4 years ago
michael watson IAH-C
★ 3.4k
0
votes
1
reply
1.3k
views
Affy Mouse 430_2 annotation
Microarray
Annotation
Cancer
affy
AnnBuilder
Microarray
Annotation
Cancer
affy
AnnBuilder
updated 21.4 years ago by
James Wettenhall
▴ 1000 • written 21.4 years ago by
James W. MacDonald
68k
0
votes
2
replies
3.5k
views
fdr adjustment in limma
limma
limma
updated 3.8 years ago by
Gordon Smyth
53k • written 21.4 years ago by
Kimpel, Mark W
▴ 890
0
votes
0
replies
828
views
Question for slide baking time?
21.4 years ago
Yi Zou
▴ 60
0
votes
4
replies
1.4k
views
Affy: pm and mm data from AffyID
affy
affy
updated 21.4 years ago by
James W. MacDonald
68k • written 21.4 years ago by
Donald Dunbar
▴ 50
0
votes
1
reply
1.2k
views
Macroarray Image Analysis (summary)
updated 21.4 years ago by
A.J. Rossini
▴ 810 • written 21.4 years ago by
Nicholas Lewin-Koh
▴ 430
0
votes
0
replies
886
views
RE: B statistic in limmaGUI
21.4 years ago
Elizabeth Brooke-Powell
▴ 160
0
votes
2
replies
1.2k
views
Limma question: Single channel repeated measures
probe
probe
updated 21.4 years ago by
Gordon Smyth
53k • written 21.4 years ago by
Nicholas Lewin-Koh
▴ 430
0
votes
1
reply
1.2k
views
loop design with limma
limma
limma
updated 21.4 years ago by
Gordon Smyth
53k • written 21.4 years ago by
Ron Ophir
▴ 80
0
votes
0
replies
1.3k
views
Re: [R] How to convert a vector into a list
convert
convert
21.4 years ago
Adaikalavan Ramasamy
★ 1.8k
0
votes
8
replies
3.0k
views
B statistic in limmaGUI
updated 21.4 years ago by
Jason Hipp
▴ 40 • written 21.4 years ago by
Elizabeth Brooke-Powell
▴ 160
0
votes
1
reply
1.1k
views
abnormal distribution after GCRMA
gcrma
gcrma
updated 21.4 years ago by
Zhijin Wu
▴ 410 • written 21.4 years ago by
Phguardiol@aol.com
▴ 720
0
votes
0
replies
833
views
Design matrix with multiple genotypes + quantified variables
Regression
Regression
21.4 years ago
Matthew Hannah
▴ 940
0
votes
1
reply
1.3k
views
AnnBuilder links to unigene
GO
Organism
AnnBuilder
PROcess
GO
Organism
AnnBuilder
PROcess
updated 21.4 years ago by
John Zhang
★ 2.9k • written 21.4 years ago by
Margaret Gardiner-Garden
▴ 160
0
votes
2
replies
891
views
mathcprobes hgu95-hgu133
updated 21.4 years ago by
Wolfgang Huber
★ 13k • written 21.4 years ago by
Dr Gyorffy Balazs
▴ 320
0
votes
2
replies
1.2k
views
Affy SNP chips.
SNP
probe
affy
SNP
probe
affy
updated 21.4 years ago by
S Peri
▴ 320 • written 21.4 years ago by
Raoul-Sam Daruwala
▴ 30
0
votes
0
replies
516
views
affy package
affy
affy
21.4 years ago
Rafael A. Irizarry
★ 2.3k
0
votes
11
replies
5.0k
views
Filtering genes using a list
updated 21.4 years ago by
James W. MacDonald
68k • written 21.4 years ago by
mcolosim@brandeis.edu
▴ 70
0
votes
0
replies
923
views
Annotate Package: How do I get the gene names and how do I write my matrix
Microarray
Annotation
Cancer
annaffy
convert
Microarray
Annotation
Cancer
annaffy
convert
21.4 years ago
James W. MacDonald
68k
0
votes
1
reply
868
views
ABPkgBuilder question
updated 21.4 years ago by
John Zhang
★ 2.9k • written 21.4 years ago by
Sean Davis
21k
0
votes
4
replies
1.8k
views
Clustering like Eisen
Clustering
Clustering
updated 21.4 years ago by
Sean Davis
21k • written 21.4 years ago by
mcolosim@brandeis.edu
▴ 70
0
votes
0
replies
668
views
problem reading genepix files using both marray andlimma functions
21.4 years ago
Gordon Smyth
53k
0
votes
4
replies
1.6k
views
problem reading genepix files using both marray andlimma functions
limma
marray
limma
marray
updated 21.4 years ago by
Bela Tiwari
▴ 60 • written 21.4 years ago by
michael watson IAH-C
★ 3.4k
0
votes
1
reply
847
views
block argument in lmFit
limma
limma
updated 21.4 years ago by
Gordon Smyth
53k • written 21.4 years ago by
Joern Kamradt
▴ 40
0
votes
0
replies
951
views
problem reading genepix files using both marray andlimma functions
Microarray
limma
Microarray
limma
21.4 years ago
Gordon Smyth
53k
0
votes
0
replies
835
views
What is the maximaze number(size) of cel files can PC handle?
cdf
affy
cdf
affy
21.4 years ago
Joyce Gu
▴ 200
0
votes
9
replies
2.0k
views
Rgraphviz for Windows
Rgraphviz
GOstats
Rgraphviz
GOstats
updated 21.4 years ago by
Jeff Gentry
★ 3.9k • written 21.4 years ago by
zhangqi007@yahoo.com
▴ 20
0
votes
0
replies
829
views
problem to read .CEL file
cdf
affy
cdf
affy
21.4 years ago
pingzhao Hu
▴ 210
0
votes
1
reply
765
views
Paired samples in Limma
21.4 years ago
Sean Davis
21k
0
votes
0
replies
919
views
problem reading genepix files using both marray andlimmafunctions
limma
limma
21.4 years ago
Bela Tiwari
▴ 60
0
votes
1
reply
830
views
Affy package
affy
affy
updated 21.4 years ago by
James W. MacDonald
68k • written 21.4 years ago by
Mette A. Peters
▴ 10
0
votes
5
replies
1.7k
views
problem reading genepix files using both marray and limma functions
limma
marray
limma
marray
updated 21.4 years ago by
Gordon Smyth
53k • written 21.4 years ago by
Bela Tiwari
▴ 60
0
votes
3
replies
1.6k
views
INstalling devel version
Microarray
Pharmacogenomics
Annotation
GO
Cancer
cdf
probe
affy
makecdfenv
limma
annaffy
21.4 years ago
Mayte Suarez-Farinas
▴ 300
0
votes
1
reply
1.3k
views
GO package for GOstats
GO
GOstats
GO
GOstats
updated 21.4 years ago by
Jeff Gentry
★ 3.9k • written 21.4 years ago by
zhangqi007@yahoo.com
▴ 20
0
votes
7
replies
2.0k
views
Installing bioconductor from behind a firewall
21.4 years ago
Michael Hoffman
▴ 30
0
votes
10
replies
2.5k
views
Harsh results using limma!
limma
limma
updated 21.4 years ago by
A.J. Rossini
▴ 810 • written 21.4 years ago by
michael watson IAH-C
★ 3.4k
0
votes
1
reply
1.1k
views
Selecting probe pairs for analysis
cdf
probe
makecdfenv
cdf
probe
makecdfenv
updated 21.4 years ago by
lgautier@altern.org
▴ 950 • written 21.4 years ago by
Hee Siew Wan
▴ 60
0
votes
1
reply
937
views
Re: Bioconductor Digest, Vol 18, Issue 10
GO
affy
GO
affy
updated 21.4 years ago by
James Wettenhall
▴ 1000 • written 21.4 years ago by
Mayte Suarez-Farinas
▴ 300
0
votes
6
replies
2.0k
views
Labels in exprs to plot
Clustering
affy
PROcess
Clustering
affy
PROcess
updated 21.4 years ago by
James W. MacDonald
68k • written 21.4 years ago by
mcolosim@brandeis.edu
▴ 70
0
votes
1
reply
1.1k
views
how to exrtact col. names from exprs()
GO
Category
GO
Category
updated 21.4 years ago by
Adaikalavan Ramasamy
★ 1.8k • written 21.4 years ago by
S Peri
▴ 320
0
votes
0
replies
795
views
Reading Affy Snp Chips. Probe level problem.
SNP
probe
affy
SNP
probe
affy
21.4 years ago
Raoul-Sam Daruwala
▴ 30
0
votes
0
replies
668
views
How to filter genes from the expreSet by using the probe setnames (affy)?
Microarray
Cancer
probe
Microarray
Cancer
probe
21.4 years ago
James W. MacDonald
68k
0
votes
0
replies
869
views
How to filter genes from the expreSet by using the probe set names (affy)?
probe
probe
21.4 years ago
Liu, Xin
▴ 120
0
votes
3
replies
1.4k
views
biclust
updated 21.4 years ago by
James W. MacDonald
68k • written 21.4 years ago by
Lana Schaffer
▴ 80
0
votes
1
reply
733
views
Getting the list of NA values from an MAList in limma
limma
limma
updated 21.4 years ago by
Sean Davis
21k • written 21.4 years ago by
michael watson IAH-C
★ 3.4k
0
votes
0
replies
787
views
change log in limma?
limma
limma
21.4 years ago
Gordon Smyth
53k
0
votes
2
replies
1.5k
views
som - can it divide the samples into clusters
GeneSpring
GeneSpring
21.4 years ago
Liu, Xin
▴ 120
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