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I am trying to find ORFs in a file of fasta sequences. I get the error " Iter Models Start Motif Fold Init UpsNt Term RBS Auto Stop Genes 1 1Error in lenScr[w] <- (lenScr[w[1L] - 1] - lenScr[w[1L] - 2]) * seq_along(w) + : replacement has length zero"
Code should be placed in three backticks as shown below
> S_wt_orfs <- FindGenes(S_wt_fa, showPlot=TRUE, allScores=TRUE)
Iter Models Start Motif Fold Init UpsNt Term RBS Auto Stop Genes
1 1Error in lenScr[w] <- (lenScr[w[1L] - 1] - lenScr[w[1L] - 2]) * seq_along(w) + :
replacement has length zero"
Thanks for reporting this issue.