Showing : Abarray • reset
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ABarray process error for ABI Human Genome Survey V2 data set
Abarray error ABI Human Genome Survey V2
7.7 years ago judemtaylor • 0
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AB Rat Genome Survey Microarray
probe ABarray probe ABarray
13.7 years ago Iain Gallagher ▴ 930
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2 way anova in Bioconductor
Microarray GO genefilter limma GeneSpring ABarray preprocessCore arrayQualityMetrics BRAIN
updated 14.4 years ago by ▴ 210 • written 14.4 years ago by ▴ 110
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2 way anova in Bioconductor
GO genefilter limma GeneSpring ABarray preprocessCore arrayQualityMetrics GO genefilter
updated 14.4 years ago by ★ 2.0k • written 14.4 years ago by ▴ 110
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Bioconductor Digest, Vol 100, Issue 28
GO TimeCourse genefilter timecourse ABarray preprocessCore GeneSelector GO TimeCourse
14.4 years ago Dennis.Burian@faa.gov ▴ 90
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Import files from Applied Biosystems 7900HT?
ABarray ABarray
updated 15.6 years ago by ★ 2.0k • written 15.6 years ago by ▴ 30
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Fwd: Urgent..........Problem in using ABarray
ABarray ABarray
16.3 years ago Priyanka Jain ▴ 20
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Urgent..........Problem in using ABarray
ABarray ABarray
16.3 years ago Priyanka Jain ▴ 20
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Venn Diagram
Cancer ABarray Cancer ABarray
updated 16.4 years ago by ▴ 450 • written 16.4 years ago by 16k
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Venn Diagram
ABarray ABarray
updated 16.4 years ago by ▴ 750 • written 16.4 years ago by ▴ 450
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ABarray
ABarray ABarray
18.1 years ago Sabah Khalid ▴ 10
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Problem with ABarray package
ABarray ABarray
updated 18.8 years ago by 68k • written 18.8 years ago by ▴ 60
12 results • Page 1 of 1
Recent ...
Replies
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Answer: featureCounts -L: high unassigned:mapq fraction by Kevin Blighe ★ 4.0k
Hi Katarzyna, The discrepancy arises because your samtools stats were restricted to genic regions only, where alignments are typically o…
Answer: Streamlining the computing time for MiloDE p-value correction in large dataset? by Kevin Blighe ★ 4.0k
Hi Joseph, I agree with ATpoint's suggestion that pseudobulk aggregation (e.g., via aggregateData in scran or similar) would likely be far…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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