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Abarray
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1.2k
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ABarray process error for ABI Human Genome Survey V2 data set
Abarray
error
ABI Human Genome Survey V2
7.8 years ago
judemtaylor
• 0
0
votes
1
reply
1.5k
views
AB Rat Genome Survey Microarray
probe
ABarray
probe
ABarray
13.8 years ago
Iain Gallagher
▴ 930
0
votes
1
reply
3.4k
views
2 way anova in Bioconductor
Microarray
GO
genefilter
limma
GeneSpring
ABarray
preprocessCore
arrayQualityMetrics
BRAIN
updated 14.4 years ago by
Guillaume Meurice
▴ 210 • written 14.4 years ago by
Dana.Stanley@csiro.au
▴ 110
0
votes
6
replies
2.6k
views
2 way anova in Bioconductor
GO
genefilter
limma
GeneSpring
ABarray
preprocessCore
arrayQualityMetrics
GO
genefilter
updated 14.5 years ago by
Jenny Drnevich
★ 2.0k • written 14.5 years ago by
Dana.Stanley@csiro.au
▴ 110
0
votes
0
replies
1.3k
views
Bioconductor Digest, Vol 100, Issue 28
GO
TimeCourse
genefilter
timecourse
ABarray
preprocessCore
GeneSelector
GO
TimeCourse
14.5 years ago
Dennis.Burian@faa.gov
▴ 90
0
votes
8
replies
3.0k
views
Import files from Applied Biosystems 7900HT?
ABarray
ABarray
updated 15.6 years ago by
Heidi Dvinge
★ 2.0k • written 15.6 years ago by
Brian Diggs
▴ 30
0
votes
0
replies
1.0k
views
Fwd: Urgent..........Problem in using ABarray
ABarray
ABarray
16.4 years ago
Priyanka Jain
▴ 20
0
votes
0
replies
7.7k
views
Urgent..........Problem in using ABarray
ABarray
ABarray
16.4 years ago
Priyanka Jain
▴ 20
0
votes
11
replies
3.8k
views
Venn Diagram
Cancer
ABarray
Cancer
ABarray
updated 16.4 years ago by
SimonNoël
▴ 450 • written 16.4 years ago by
Hervé Pagès
16k
0
votes
1
reply
1.4k
views
Venn Diagram
ABarray
ABarray
updated 16.4 years ago by
Thomas Hampton
▴ 750 • written 16.4 years ago by
SimonNoël
▴ 450
0
votes
0
replies
1.1k
views
ABarray
ABarray
ABarray
18.1 years ago
Sabah Khalid
▴ 10
0
votes
3
replies
1.7k
views
Problem with ABarray package
ABarray
ABarray
updated 18.8 years ago by
James W. MacDonald
68k • written 18.8 years ago by
Alison Ziesel
▴ 60
12 results • Page
1 of 1
Recent ...
Replies
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment
by
Michael Love
43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA
by
Gordon Smyth
53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR
by
James W. MacDonald
68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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