Showing : BioNERO • reset
2
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bioNeuro plot_expression_profile - how to order samples in plot output
plot_expression_profile BioNERO
13 months ago Christopher ▴ 20
1
vote
4
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650
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BioNero - problem with module_trait_cor function
BioNERO
15 months ago matevz.likar • 0
1
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1
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563
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BioNERO and Cystoscope
#BioNERO BioNERO Cystoscope
updated 20 months ago by ▴ 40 • written 20 months ago by • 0
0
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1
reply
654
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Filter the GRN networks based on the optimal scale-free topology (SFT)
GRN BioNERO
updated 20 months ago by ▴ 40 • written 21 months ago by • 0
0
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2
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980
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Data processing with BioNERO
BioNERO Pviz
23 months ago • updated 20 months ago zxd95 • 0
0
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3
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1.2k
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Issue with module-trait analysis in BioNero
BioNERO
updated 2.1 years ago by ▴ 40 • written 2.1 years ago by • 0
6 results • Page 1 of 1
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Comment: [How to construct a model.matrix ] by kyj2226 • 0
Thanks to you, I learn a lot. Many thanks, Yujin.
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0
thank you for your advice, I posted separate post.
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by Robert Castelo ★ 3.4k
Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…
Answer: DESeq2 rerun returns different results by ATpoint ★ 4.5k
DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…
Answer: [How to construct a model.matrix ] by Gordon Smyth 51k
> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…
Votes
Answer: [How to construct a model.matrix ]
C: DESeq2 baseMean values for each sample
C: DESeq2 baseMean values for each sample
Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta
A: Some questions for remove batch effect by using mnnCorrect
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