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Biocmanager
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0
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2
replies
4.0k
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Problem installing scater
scater
R
biocmanager
bioconductor
updated 7.1 years ago by
Aaron Lun
★ 29k • written 7.1 years ago by
hfberg
• 0
3
votes
4
replies
2.7k
views
Error: 'biocValid' is not an exported object from 'namespace:BiocManager'
biocmanager
updated 7.2 years ago by
shepherl
4.3k • written 7.2 years ago by
mariatuffy
• 0
0
votes
3
replies
5.7k
views
Rhdf5lib install problems
R
bioconductor
rhdf5
biocmanager
3.5
7.2 years ago
cem45
• 0
1
vote
6
replies
12k
views
Cannot install Bioconductor Packages. Cannot install BiocManager.
software error
bioconductor
biocmanager
updated 7.2 years ago by
shepherl
4.3k • written 7.2 years ago by
reventropy2003
▴ 10
1
vote
6
replies
3.3k
views
Recommended way to use BiocInstaller / BiocManager in packages on CRAN?
cran
biocinstaller
biocmanager
updated 7.2 years ago by
Martin Morgan
25k • written 7.2 years ago by
Kevin Ushey
▴ 130
1
vote
2
replies
3.0k
views
I can't install the pasilla package
pasilla
biocmanager
updated 7.2 years ago by
James W. MacDonald
68k • written 7.2 years ago by
Aurora
▴ 20
1
vote
1
reply
1.5k
views
GenomicFeatures won't install for 3.8 release
installation
biocmanager
updated 7.2 years ago by
shepherl
4.3k • written 7.2 years ago by
Michael Steinbaugh
▴ 90
0
votes
4
replies
2.1k
views
BiocManager::install() breaks; can't install bioc-devel
biocmanager
installation
7.4 years ago
Kyle Johnsen
▴ 30
58 results • Page
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Comment: Confirm that OpenStats will not be archived (pryr dependency)
by
Marina
• 0
Thank you!
Comment: AnnotationForge makeOrgPackage rsqlite_send_query error
by
ansley.r.burtch
• 0
Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …
Comment: limpa analysis advice
by
Gordon Smyth
53k
I prefer for limpa to work on precursor intensities, because my understanding is that precursors are the basic unit of identification and q…
Answer: Confirm that OpenStats will not be archived (pryr dependency)
by
shepherl
4.3k
As long as OpenStats is building cleanly and all needed stated dependencies are on CRAN or Bioconductor, OpenStats will not be archived. I…
Comment: Lowly expressed genes reported as significant when using lfcThreshold in DESeq
by
Michael Love
43k
Yes, I find that the LFC shrinkage and its corresponding stat `svalue` if you use lfcShrink with a threshold often returns more reliable ge…
Votes
Comment: limpa analysis advice
C: AnnotationForge makeOrgPackage rsqlite_send_query error
Answer: Limpa Pipeline Order
Answer: Array weights in dpcDE
Answer: Array weights in dpcDE
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