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ChIP-seq
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Job:
Bioinformatics position at the Department of Genetics, Stanford, California
next-generation sequencing
rna-seq
chip-seq
single cell
Job
9.4 years ago
Katja Hebestreit
▴ 130
0
votes
2
replies
2.3k
views
Diffbind plotting on contrasts
diffbind
chip-seq
updated 9.6 years ago by
AB
▴ 110 • written 10.7 years ago by
medinaale
• 0
0
votes
1
reply
3.0k
views
diffBind - bam not accessible
diffbind
chip-seq
bam
9.9 years ago
eli7javasky
• 0
3
votes
9
replies
3.8k
views
ChIPQC and broadPeak input
chipseq
chipqc
chip-seq
10.0 years ago
lindahove
▴ 10
0
votes
1
reply
1.6k
views
News:
Course Announcement: Use R / Bioconductor for Sequence Analysis (Intermediate Course)
Course
RNA-Seq
Chip-seq
Parallel
News
10.5 years ago
Martin Morgan
25k
4
votes
4
replies
2.1k
views
Strand-aware CSAW analysis
csaw
chip-seq
clip-seq
10.6 years ago
IV
▴ 30
2
votes
1
reply
1.6k
views
problem with characters in chromosome names in DiffBind dba
DiffBind
ChIP-Seq
updated 10.8 years ago by
Rory Stark
★ 5.2k • written 10.8 years ago by
Georg Otto
▴ 120
57 results • Page
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Comment: GO.db and others package Download failure
by
James W. MacDonald
68k
Also, you never need to use anything but `BiocManager::install` to install any package, which has the beneficial side effect of ensuring th…
Comment: GO.db and others package Download failure
by
James W. MacDonald
68k
Yes. Your packages have odd Y version numbers (where the version is X.Y.Z). That means they are devel packages (release versions have even …
Comment: GO.db and others package Download failure
by
Skyler
• 0
Am I using Bioc-devel?
Comment: GO.db and others package Download failure
by
James W. MacDonald
68k
Is there a reason to use Bioc-devel? If not, you should be using the release version (which I am, and which installs `GO.db` without compla…
Comment: GO.db and others package Download failure
by
Skyler
• 0
Hi James, Below I have inserted all of my code. I have run r as an administrator and not as an administrator. I have changed my CRANmirror …
Votes
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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