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ChIPQCreport
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Unhelpful Errors Running ChIPQC on Computing Cluster
chipqc
chipqcreport
6.7 years ago • updated 6.6 years ago
jared.andrews07
▴ 30
1
vote
3
replies
1.1k
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ChIPQC installation does not force latest DiffBind version
chipqc
diffbind
chipqcreport
updated 6.9 years ago by
Thomas Carroll
▴ 420 • written 6.9 years ago by
Coby Viner
▴ 50
4
votes
2
replies
1.3k
views
ChIPQC : ChIPQCreport(experiment) swap memory overload
ChIPQC
ChIPQCreport
updated 6.9 years ago by
Thomas Carroll
▴ 420 • written 7.0 years ago by
ZheFrench
▴ 50
0
votes
1
reply
2.2k
views
Error computing metrics with ChIPQC (Bioconductor v3.5, ChIPQC v2.1.12)
chipqc
chipqcreport
updated 6.9 years ago by
Thomas Carroll
▴ 420 • written 6.9 years ago by
Roger
• 0
0
votes
4
replies
1.6k
views
ChIPQCreport Total number of duplicates differs from multiqc/fastqc & RelCC is Inf
ChIPQC
ChIPQCreport
updated 6.9 years ago by
Thomas Carroll
▴ 420 • written 6.9 years ago by
ZheFrench
▴ 50
0
votes
2
replies
979
views
ChipQCreport coverage plot failure?
ChipQC
chipqcreport
5.8 years ago
tapio.envall
• 0
3
votes
5
replies
2.5k
views
ChIPQC - can't read in bam files
chipqc
chipqcreport
5.7 years ago
molly_the_minotaur
▴ 30
0
votes
1
reply
536
views
Empty ChipQC Report
ChipQCReport
updated 15 months ago by
Okan
• 0 • written 17 months ago by
stacy.genovese
• 0
8 results • Page
1 of 1
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Answer: Differential gene expression analysis results
by
ATpoint
★ 4.1k
Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…
Comment: deseq2 results
by
sajadahmad41454
• 0
thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.
Comment: deseq2 results
by
swbarnes2
★ 1.4k
It looks like the PCA plot of a real RNASeq experiment. The red outlier on the left might be the mathematical reason why you have few vali…
Comment: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
by
Dylan.Sheerin
• 0
Thank you very much, Gordon. I'll give voomLmFit a go!
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
by
Gordon Smyth
50k
Including subjectID in the design matrix always accounts for unbalanced sampling and patient variation but subjects with incomplete records…
Votes
Comment: deseq2 results
Comment: deseq2 results
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
Answer: Extremely small p-values using Limma for proteomic data
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