Biostar Linux

Showing : Linux • reset

votes

replies

2.1k

views

biomart linux

updated 13 months ago by Martin Morgan 25k • written 3.8 years ago by christopher.mcfall • 0

vote

replies

602

views

DEXSEq Linux

updated 2.7 years ago by Alejandro Reyes ★ 1.8k • written 2.7 years ago by justinkablan225 • 0

votes

407

views

ChemmineOB Linux Installation

2.8 years ago jandrosavich • 0

votes

replies

2.2k

views

DESEq2 R linux RcppArmadillo

2.9 years ago RS1 • 0

votes

replies

479

views

bioinformatician job Linux NGS Job

3.1 years ago l.brown ▴ 10

votes

replies

565

views

python bio ngs linux Job

3.8 years ago EMBL Recruitment • 0

vote

replies

755

views

biocparallel oligo rma linux parallel

4.1 years ago s.munster ▴ 40

votes

713

views

R h5ls windows linux

updated 4.2 years ago by Mike Smith ★ 5.3k • written 4.3 years ago by maxime.fortin • 0

vote

replies

915

views

linux rsubread installation

updated 4.5 years ago by Mike Smith ★ 5.3k • written 4.5 years ago by hjmangalam • 0

votes

replies

1.5k

views

Bioconduct or Chipseeker CentOS7 Linux installation

updated 5.2 years ago by Guangchuang Yu ★ 1.2k • written 5.2 years ago by spsp9987 • 0

votes

replies

1.7k

views

Rcpp genefo linux linux mint Rstudio

updated 5.5 years ago by mfox • 0 • written 5.5 years ago by anjali.krishna1008 • 0

votes

835

views

linux r phylogenetic computational biology

updated 6.6 years ago by Hervé Pagès 15k • written 6.6 years ago by guilherme • 0

votes

747

views

linux R server

updated 7.3 years ago by James W. MacDonald 58k • written 7.3 years ago by Matthew McCormack ▴ 180

13 results • Page 1 of 1

Recent ...

Replies

Comment: Trying to follow a gene set analyisis in R by Michael Love 35k

It looks like you only have a single sample.

Comment: Trying to follow a gene set analyisis in R by leonardorosas2001 • 0

I get the following > design = model.matrix(~ es$condition) > design (Intercept) es$conditiondex4 attr(,"assign") [1] 0 1 attr(,"co…

Comment: How to use subjunc for differential splicing analysis? by Yang Liao ▴ 280

Annotation to the *subjunc* aligner helps the aligner to better map the reads. The aligner generates BAM files, which contains mapped reads…

Answer: universalmotif, question about enrich_motifs function and number of hits returne by btremblay ▴ 30

Hi, After doing some digging I've isolated the issue to being related to the threshold calculation which you request with the `threshold…

Answer: DE analysis model matrix for paired samples by Michael Love 35k

Agree with swbarnes2. It just seems like the condition effect is very small. Also I'd double check the metadata. Sometimes samples are swap…

Votes

A: DNAcopy

Comment: Using DiffBind blacklists and greylists with results mapped to BDGP6

Answer: How to use subjunc for differential splicing analysis?

Answer: catchKallisto results are not counts

Awards • All

Popular Question to mikhael.manurung ▴ 230

Scholar to Gordon Smyth 44k

Popular Question to Stephanie M. Gogarten ▴ 820

Teacher to Aaron Lun ★ 27k