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ChipDb
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AnnotationDbi Error: PROSITE is defunct.
ChipDb
AnnotationDbi
Annotation
13 months ago • updated 12 months ago
ahiser
• 0
0
votes
3
replies
739
views
How to handle multiple assay versions in a ChipDb annotation package
ChipDb
AnnotationDbi
AnnotationForge
updated 15 months ago by
James W. MacDonald
65k • written 15 months ago by
ahiser
• 0
2
votes
2
replies
2.4k
views
ChIP seeker annotation error
DiffBind
chipseq
ChIPseeker
ChipDb
annotation
3.5 years ago • updated 3.2 years ago
Mar Mar
▴ 20
0
votes
4
replies
1.7k
views
hugene10sttranscriptclusterACCNUM has no mappings
Annotation
GO
ChipDb
probe
updated 9.6 years ago by
Thomas Pfau
▴ 20 • written 9.6 years ago by
Marc Carlson
★ 7.2k
4 results • Page
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Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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