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Clariom
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625
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Aligning Clariom D against reference Genome and transcriptome pipeline
Clariom
Align
MicroarrayData
Alignment
Microarray
14 months ago
jsharif
• 0
1
vote
5
replies
1.2k
views
Correct annotation R package for human clariom array analysis
clariom
oligo
affycoretools
pd.hugene.2.0.st
updated 5.2 years ago by
James W. MacDonald
65k • written 5.2 years ago by
svlachavas
▴ 830
1
vote
3
replies
857
views
Selecting probe data from Clariom D assays using the fid probe tags
clariom
pd.clariom.d.human
updated 5.5 years ago by
James W. MacDonald
65k • written 5.5 years ago by
AliStair Rust
• 0
1
vote
1
reply
987
views
RNA degradation plot for Clariom S and Clariom D
Rna degradation
Clariom
updated 6.1 years ago by
James W. MacDonald
65k • written 6.1 years ago by
kritikamish99
▴ 10
2
votes
4
replies
2.2k
views
affycoretools annotateEset problem using Clariom D arrays
affycoretools
clariom
updated 6.7 years ago by
James W. MacDonald
65k • written 6.7 years ago by
willj
▴ 30
2
votes
2
replies
1.0k
views
paCalls with Clariom Chips
oligo
microarray
clariom
updated 6.8 years ago by
James W. MacDonald
65k • written 6.8 years ago by
kmvaldez2
• 0
0
votes
0
replies
788
views
genefu and clariom d
clariom
genefu
6.8 years ago
info
• 0
7 results • Page
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Recent ...
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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
That ll be helpful. Thank you.
Comment: Log-cpm values from limma
by
Shaimaa Gamal
• 0
I have performed RUVg correction and extracted W, factors of unwanted variation. According to limma guide, > In the limma approach to RNA…
Comment: DSS CpG coverage threshold
by
j.gilbert
• 0
Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says: *Q: Do I need to filter out…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Segmentation is of the whole genome, I'll write some code for doing this later today.
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
I'll take a look later. For next time, I've edited your post by enclosing the code in triple backticks (on their own link). This properly …
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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