Showing : Clustering • reset
0
votes
0
replies
2.3k
views
Mean or median centering data
Normalization Clustering Normalization Clustering
18.0 years ago kumar s ▴ 10
0
votes
0
replies
898
views
Clustering question
Clustering Clustering
18.0 years ago Srinivas Iyyer ▴ 600
0
votes
1
reply
1.2k
views
How to extract Hopach MSS value
Clustering hopach Clustering hopach
updated 18.0 years ago by 6.7k • written 18.0 years ago by ▴ 20
0
votes
0
replies
1.8k
views
Ward's linkage, agnes and hclust
Clustering Clustering
18.0 years ago Nicolas Servant ▴ 260
0
votes
0
replies
1.5k
views
SECOND ANNOUNCEMENT: IV International Course on Microarray Data Analysis
Microarray Annotation Normalization GO Visualization Classification Clustering Survival GO
18.1 years ago Ana Conesa ▴ 340
0
votes
0
replies
924
views
GO graph plotting with some in color
GO Clustering graph PROcess GO Clustering graph PROcess
18.2 years ago Loren Engrav ★ 1.0k
0
votes
3
replies
1.8k
views
tweaks for the heatmap ()?
Clustering marray Clustering marray
updated 18.2 years ago by ▴ 510 • written 18.3 years ago by ▴ 270
0
votes
0
replies
1.6k
views
FIRST ANNOUNCEMENT: IV International Course on Microarray Data Analysis
Microarray Annotation Normalization GO Visualization Classification Clustering Survival GO
18.2 years ago Ana Conesa ▴ 340
0
votes
0
replies
1.2k
views
made4, memory issues
Network Clustering Cancer Yeast made4 Network Clustering Cancer Yeast made4
18.3 years ago Aedin Culhane ▴ 510
0
votes
0
replies
2.1k
views
Median-Interquartile Normalization
Microarray SystemsBiology Annotation GO Preprocessing Clustering Cancer Yeast Organism GO
18.3 years ago McGee, Monnie ▴ 300
0
votes
0
replies
1.2k
views
clustering methods for gene expression
Microarray Clustering probe limma Microarray Clustering probe limma
18.3 years ago Donna Toleno ▴ 90
0
votes
0
replies
1.2k
views
R/BioC workshops in Southern California
Cheminformatics Clustering Cheminformatics Clustering
18.4 years ago Thomas Girke ★ 1.7k
0
votes
1
reply
1.1k
views
Loop design -> inferring
GO Clustering limma GO Clustering limma
updated 18.5 years ago by ▴ 220 • written 18.5 years ago by 53k
0
votes
0
replies
1.1k
views
Distance function and gene expression standardization for clustering
Clustering Cancer Clustering Cancer
18.5 years ago Serge Eifes ▴ 90
0
votes
4
replies
1.1k
views
Is a change in kit significant?
Clustering Cancer limma Clustering Cancer limma
updated 18.8 years ago by ★ 1.3k • written 18.8 years ago by ★ 1.9k
0
votes
3
replies
2.1k
views
Correlation works, but dist() runs out of memory
Clustering Cancer Clustering Cancer
updated 18.9 years ago by 21k • written 18.9 years ago by ★ 1.9k
0
votes
0
replies
1.2k
views
Course*** R/S+: Fundamentals and Programming Techniques - Princeton, March 1-2
Microarray Classification Clustering Regression Microarray Classification Clustering
19.0 years ago sue@xlsolutions-corp.com ▴ 570
0
votes
1
reply
4.2k
views
heatmap without column's dendrogram
Clustering Clustering
updated 19.0 years ago by ★ 1.3k • written 19.0 years ago by ▴ 90
0
votes
1
reply
903
views
pre-processing Agilent data to remove a bad sample
Microarray Clustering Microarray Clustering
updated 19.0 years ago by ★ 1.3k • written 19.0 years ago by ▴ 10
0
votes
0
replies
1.3k
views
Analysis with MBNI re-mapped (custom) CDF files
Microarray Clustering cdf probe affy affyPLM mmgmos Microarray Clustering cdf probe
19.0 years ago Richard Pearson ▴ 390
0
votes
2
replies
1.9k
views
results of justPlier vs. RMA
Clustering affy plier affyio Clustering affy plier affyio
updated 19.2 years ago by ▴ 120 • written 19.3 years ago by ▴ 360
0
votes
3
replies
1.7k
views
significance of "wrong" clustering of differential genes
Clustering limma Clustering limma
updated 19.2 years ago by ★ 6.0k • written 19.2 years ago by ▴ 830
0
votes
0
replies
797
views
R/BioC workshops in Southern California
Clustering Clustering
19.3 years ago Thomas Girke ★ 1.7k
0
votes
1
reply
1.0k
views
heatmap_2
Clustering Clustering
updated 19.4 years ago by ▴ 70 • written 19.4 years ago by ▴ 270
0
votes
0
replies
1.7k
views
hclust - order of rows/columns
Clustering Clustering
19.4 years ago Lina Hultin-Rosenberg ▴ 180
0
votes
0
replies
1.4k
views
Analysing categorical CGH data
Clustering Cancer CGH GLAD made4 Clustering Cancer CGH GLAD made4
19.5 years ago Aedin Culhane ▴ 510
0
votes
0
replies
1.4k
views
[SPAM?] Bioconductor Digest, Vol 41, Issue 22 (Out of Office)
SNP Microarray Annotation GO Network Clustering Survival Cancer hgu133a cdf probe affy
19.6 years ago Todd Nick ▴ 10
0
votes
3
replies
5.0k
views
Error: cannot allocate vector of size ...
Clustering Clustering
updated 19.6 years ago by 68k • written 19.6 years ago by ▴ 80
0
votes
0
replies
1.2k
views
Analysing categorical CGH data
Clustering Cancer CGH made4 Clustering Cancer CGH made4
19.6 years ago Richard Birnie ▴ 10
0
votes
0
replies
1.1k
views
last call for Boston bioc Training, 13-15 july, content revised
Annotation GO Preprocessing Clustering Yeast probe RSNPper biomaRt Annotation GO Yeast
19.6 years ago Vincent J. Carey, Jr. 6.7k
0
votes
0
replies
929
views
display goCluster graph with specific go term
GO Visualization Clustering graph goCluster GO Visualization Clustering graph goCluster
19.6 years ago Tabare Mourot ▴ 100
0
votes
0
replies
1.2k
views
hopach and heatmap
Clustering hopach Clustering hopach
19.6 years ago Ivan Baxter ▴ 60
0
votes
1
reply
1.8k
views
2 Courses Near You - (1) Introduction to R/S+ programming: Microarrays Analysis and Bioconductor, (2) R/Splus Fundamentals and Programming Techniques
Visualization Clustering Visualization Clustering
updated 19.7 years ago by ▴ 130 • written 19.7 years ago by ▴ 570
0
votes
4
replies
1.4k
views
limma: get all sig genes from multiple contrasts
Clustering limma Clustering limma
updated 19.7 years ago by ▴ 270 • written 19.7 years ago by ▴ 60
0
votes
0
replies
1.3k
views
[heatmap] different distance functions for columns and for rows
Clustering Clustering
19.7 years ago Ron Ophir ▴ 270
0
votes
0
replies
1.1k
views
[heatmap] different distance functions for columns and for rows
Clustering Clustering
19.7 years ago Sean Davis 21k
0
votes
1
reply
1.4k
views
[heatmap] different distance functions for columns and for rows
Clustering Clustering
updated 19.7 years ago by 21k • written 19.7 years ago by ▴ 270
0
votes
0
replies
1.0k
views
Question regarding handling technical replicates for Affy arrays
GO Clustering affy limma GO Clustering affy limma
19.7 years ago Gordon Smyth 53k
0
votes
0
replies
1.3k
views
Question regarding handling technical replicates for Affy arrays
GO Clustering affy limma GO Clustering affy limma
19.7 years ago noel0925@sbcglobal.net ▴ 90
0
votes
0
replies
1.7k
views
Bioconductor 1.8 for R 2.3.0 is released!
BiocViews aCGH SNP Microarray Annotation GO Clustering Cancer Yeast cdf probe RMAGEML
19.8 years ago Seth Falcon ★ 7.4k
0
votes
1
reply
1.1k
views
hopach package for clustering
Clustering TimeCourse timecourse Clustering TimeCourse timecourse
updated 19.9 years ago by ▴ 780 • written 19.9 years ago by ▴ 250
0
votes
6
replies
2.1k
views
clustering question
Clustering Clustering
updated 20.0 years ago by ★ 6.0k • written 20.0 years ago by ▴ 890
0
votes
3
replies
3.2k
views
Inherits(x,"data.frame") error in SamR
Microarray Normalization Preprocessing Bayesian Clustering TimeCourse Cancer affy vsn LPE
20.0 years ago McGee, Monnie ▴ 300
0
votes
3
replies
2.1k
views
Timeseries loop design analysis using Limma or Maanova?
Bayesian Clustering TimeCourse timecourse oligo Bayesian Clustering TimeCourse timecourse
20.0 years ago Pete ▴ 70
0
votes
2
replies
1.2k
views
Hier.Clustering: group size effect
Clustering Clustering
updated 20.0 years ago by ▴ 140 • written 20.0 years ago by ▴ 310
0
votes
1
reply
1.4k
views
LIMMA, SAM & clustering
Visualization Clustering limma Visualization Clustering limma
updated 20.0 years ago by 68k • written 20.0 years ago by ▴ 100
0
votes
1
reply
1.4k
views
average linkage clustering in Eisen's Cluster vs. that in hclust
Clustering Clustering
updated 20.2 years ago by ▴ 100 • written 20.2 years ago by ▴ 290
0
votes
1
reply
1.7k
views
Again on heatmap clusters - dChip style, Pearson's distance. Which solutions ?
Clustering PROcess Clustering PROcess
updated 20.2 years ago by ★ 1.8k • written 20.2 years ago by ▴ 540
0
votes
1
reply
1.4k
views
omit row dendrogram in heatmap
Clustering Clustering
updated 20.2 years ago by ▴ 140 • written 20.2 years ago by ▴ 510
0
votes
0
replies
1.6k
views
Bioinformatics Jobs at ArraDx
Microarray Annotation Normalization Clustering Cancer Microarray Annotation Normalization
20.2 years ago Proutski, Vitali ▴ 10
374 results • Page 6 of 8
Recent ...
Replies
Comment: soGGi error by shepherl 4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Comment: using limma trend workflow in CAMERA by A.Barden ▴ 20
Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?
Comment: Upcoming Ensembl API and data access changes - new blog post available by Tikaaa2sahaaaq2c • 0
Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…
Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
Awards • All
Popular Question to Guido Hooiveld ★ 4.1k
Popular Question to shepherl 4.3k
Popular Question to Steve Lianoglou ★ 13k
Teacher to Michael Love 43k
Supporter to fl ▴ 20
Locations • All
Wageningen University, Wageningen, the Netherlands, 22 minutes ago
United States, 1 hour ago
United Kingdom, 2 hours ago
United States, 2 hours ago
United States, 4 hours ago
Traffic: 1288 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6