Showing : DES • reset
0
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3
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309
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DESeq2 inconsistent fits depending on model design with interacting factors
des DESeq2
written 4 months ago by ▴ 10
0
votes
1
reply
658
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unreal negative log2fc values
DESeq2 des
updated 18 months ago by 68k • written 18 months ago by • 0
2
votes
9
replies
1.9k
views
Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
DESeq2 RUVSeq RUVseq BatchEffect DES
updated 20 months ago by 68k • written 20 months ago by • 0
0
votes
1
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645
views
Bioinformatics student
Des DESeq2
updated 20 months ago by • 0 • written 20 months ago by • 0
2
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2
replies
805
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With DESeq2 "Not full rank" Error with design
DESeq2 DEs
21 months ago feather-W • 0
0
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1
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920
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Design structure
DESeq2 des
updated 3.1 years ago by 43k • written 3.1 years ago by • 0
0
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1
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1.0k
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Design Matrix Singularity Error
DES DESIGN
updated 3.3 years ago by 43k • written 3.3 years ago by • 0
0
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1
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1.2k
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Matrix not full rank (time-series experiment with one group and covariates )
DESeq2 DES
updated 5.0 years ago by 43k • written 5.0 years ago by ▴ 10
8 results • Page 1 of 1
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Answer: Limma-voom sample weights and impact on DEG numbers by Gordon Smyth 53k
I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…
Votes
Error in SummarizedExperiment(assays = SimpleList(counts = countData)
Answer: DESeq2 class error: superclass "ExpData" not defined in the environment of the o
Limma-voom sample weights and impact on DEG numbers
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
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