Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
DESE
•
reset
2
votes
2
replies
768
views
Why is the inclusion of RUVs not reflected in the EDA plots produced from normalised counts extracted from deseq2?
RUVSeq
DESeq2
dese
12 months ago
BioinfGuru
▴ 70
0
votes
1
reply
537
views
collapseReplicates dimension error
DESeq2
Dese
updated 17 months ago by
Michael Love
43k • written 17 months ago by
Léa
• 0
0
votes
3
replies
717
views
DESeq2 Results in Different Pvalue & Log2FC using the same code and data
DESeq2
dese
written 18 months ago by
Xu
• 0
0
votes
2
replies
731
views
Cross-species analysis using DESeq2 - size factor computation
dese
DESeq2
19 months ago
pl23
• 0
0
votes
2
replies
1.1k
views
Linear Model Fitting and Colinearity
dese
DESeq2
21 months ago
Hugo
• 0
0
votes
5
replies
1.3k
views
DESeq2 analysis
DESe
DESeq2
2.1 years ago
Adèle
• 0
0
votes
2
replies
2.2k
views
Handling NA's in Deseq2
Dese
DESeq2
2.3 years ago • updated 2.2 years ago
Asger Mølgaard
• 0
2
votes
17
replies
3.2k
views
lfcshrink error DESeq2
DESeq2
lfcshrink
DESe
updated 2.3 years ago by
Michael Love
43k • written 2.3 years ago by
Alina
• 0
4
votes
5
replies
2.1k
views
Adding cell population estimates as a covariate in DESeq2 differential gene expression analysis
DESeq2
Dese
DifferentialRegulation
differe
updated 15 months ago by
ij283
• 0 • written 2.4 years ago by
Bernardo
▴ 10
3
votes
3
replies
1.3k
views
Merging two plated in R
dese
DESeq2
updated 3.3 years ago by
James W. MacDonald
68k • written 3.3 years ago by
lmrogers34
▴ 10
0
votes
5
replies
4.5k
views
Error in DESeqDataSet(se, design = design, ignoreRank) : all variables in design formula must be columns in colData
DESE
DESeq2
updated 3.3 years ago by
Basti
▴ 780 • written 3.3 years ago by
Maryam.sed1400
• 0
1
vote
3
replies
1.9k
views
ERROR: unable to find an inherited method for function ‘dispersions<-’ for signature ‘"DESeqDataSet",
DESeq2
dese
3.6 years ago
aedavids
▴ 20
0
votes
2
replies
1.2k
views
DESeq2 ratio of ratios and p-value
DESeq2
dese
3.8 years ago
wilfried.guiblet
• 0
0
votes
2
replies
892
views
where the gene is overexpressed and down regulated while doing DESeq2 analysis
DESe
DESeq2
updated 3.9 years ago by
Michael Love
43k • written 3.9 years ago by
Dinesh
• 0
2
votes
3
replies
1.3k
views
Single sided P-value for DESeq2 Likelihood Ratio Test
DESeq2
DESe
updated 4.5 years ago by
Michael Love
43k • written 4.5 years ago by
glennli
• 0
0
votes
2
replies
1.2k
views
Effect of within-group variation on gene expression analysis
DESeq2
updated 4.8 years ago by
Michael Love
43k • written 4.8 years ago by
hpapoli
• 0
16 results • Page
1 of 1
Recent ...
Replies
Comment: EuroBioC2024 abstract submission is open!
by
Finnianfly
• 0
What specific requirements should be noted when preparing abstracts for presentation formats such as short talks, package demos, or posters…
Comment: Length of 'dimnames' [1] not equal to array extent
by
Francesco Silvestro
• 0
Resolved the error message!
Comment: WGCNA analysis on RNAseq and proteoimcs data
by
sum31278
• 0
Hi sagigordon, Can you share how you performed WGCNA analysis for proteomics data? Thanks
Comment: European Bioconductor Conference 2023 planning
by
inadequate.peacock.iiag
• 0
I once faced a dilemma similar to this when coordinating a smaller local event; despite initial hesitation, I learned invaluable skills and…
Comment: ROAST compare results with complex design
by
Gordon Smyth
52k
It's also worth pointing out that the syntax for `camera` and `mroast` is the same, so I wonder how OP did the earlier `camera` analysis.
Votes
Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
Awards
• All
Popular Question
to
sum31278
• 0
Popular Question
to
Gordon Smyth
52k
Popular Question
to
boczniak767
▴ 740
Popular Question
to
Young Tae
• 0
Popular Question
to
Robert Castelo
★ 3.4k
Locations
• All
The city by the bay,
13 minutes ago
Netherlands,
20 minutes ago
United States,
57 minutes ago
Pittsburgh, United States,
58 minutes ago
EMBL Heidelberg,
1 hour ago
Traffic: 1093 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6