Bioconductor ENTREZID

Showing : ENTREZID • reset

0

votes

13

replies

12k

views

KEGG enrichKEGG R entrezid

2.2 years ago Laia ▴ 10

2

votes

5

replies

5.1k

views

ID Uniprot EntrezID

3.0 years ago tom.kloter • 0

5

votes

7

replies

3.6k

views

ENTREZID SYMBOL AnnotationDbi org.Hs.eg.db

updated 4.4 years ago by Gordon Smyth 52k • written 4.4 years ago by bastien_chassagnol • 0

1

vote

5

replies

4.2k

views

deseq2 dataframe ensembl gene id gene symbol entrezid

updated 9 weeks ago by Erika • 0 • written 5.4 years ago by jason.williams ▴ 10

4 results • Page 1 of 1

Recent ...

Replies

Answer: Limma suqeezeVar by Gordon Smyth 52k

I am not quite clear why you're not using the limma package directly, because it will compute all the variances and the df automatically fo…

Comment: Discrepancies in normalised count data vs unnormalised by swbarnes2 ★ 1.4k

Well, that's going to make each sample normalize quite differently. So you should expect large difference between normalized and unnormali…

Comment: Can't install BioC packages (and manager) behind firewall by Marcel Ramos 700

Hi Delphine, Please make sure that your SSL certificates are up to date. Check with your system's administrator. Your browser may be usin…

Comment: Limma trend with limpa by Alejandro • 0

Dear Gordon, Thank you very much!

Answer: DESeq2 from phyloseq error by asafpr • 0

Apparently, I left this line: ```r setClassUnion("ExpData", c("matrix", "SummarizedExperiment")) ``` to patch the ExpData issue which was …

Votes

Deseq2 DE analysis of host-pathogen samples (model separately or jointly?)

Comment: Check removeBatchEffect effectiveness

Answer: Check removeBatchEffect effectiveness

A: what should I do with many zero counts from Salmon quantification

Comment: parameters of filterByExpr

Awards • All