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News: Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
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written 2.2 years ago by ▴ 740
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News: European Bioconductor Conference 2023 planning
Europe Conference EuroBioC Events News
written 2.2 years ago by ▴ 90
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News: News: BioCAsia2023 Abstract Submission & Registration Now Open!
Events BioCAsia Conference
16 months ago Maria Doyle ▴ 90
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News: Bioconductor call for events!
Bioconductor events community
22 months ago Maria Doyle ▴ 90
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News: Registrations are now open for BioC Asia 2022
Asia BioCAsia Conferences Events News
2.3 years ago • updated 2.2 years ago Peter Hickey ▴ 740
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News: Public Calendar of Events
Bioconductor events News
4.6 years ago shepherl 4.1k
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News: EMBO | EMBL Symposium: The Molecular Basis and Evolution of Sexual Dimorphism
events biology sexual dimorphism conference News
5.0 years ago EMBL Events • 0
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News: Registrations are now open for BioC Asia 2019
BioC Asia Events Conferences Bioinfosummer News
5.3 years ago Steve Pederson ▴ 170
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Comment: iam not able to do retrive data using GEOquery R package by James W. MacDonald 67k
Another alternative is to use the `GEOmetadb` package ([vignette here)][1], which will allow you to make queries to identify GEO datasets t…
Answer: iam not able to do retrive data using GEOquery R package by James W. MacDonald 67k
Before you try to use a function, you should read the help page to ensure that you are using the correct argument type. As an example, here…
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu by James W. MacDonald 67k
It's not the version control in R/Bioconductor though. It's the version of the genome. OP used Ensembl build 113 to align and then noted th…
Comment: Why did PCA plots look exactly the same after adjusting for batch covariate in D by Quang ▴ 10
Also, Michael, when I used SVA in addition, so I have the `design = ~ Date_lysed + SV1 + condition_subset`, do I just set `mat_corrected <-…
Comment: Differential variability modelling with vst() expression by Michael Love 43k
See Gordon's reply below for an implementation you can use directly.
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Answer: Differential variability modelling with vst() expression
Answer: Differential variability modelling with vst() expression
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Comment: Why did PCA plots look exactly the same after adjusting for batch covariate in D
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