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Maria Doyle
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Maria Doyle
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8 months ago • updated 6 months ago
Peter Hickey
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updated 5 months ago by
neckerchieffickle
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written 6 months ago by
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shepherl
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Steve Pederson
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Comment: Extract Limma Adjusted Values for Plotting
by
phelankj
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0
Thanks, on the normalized values using the same formula?
Answer: Extract Limma Adjusted Values for Plotting
by
James W. MacDonald
63k
You should use `removeBatchEffect` for that.
Comment: Interpret plot from DiffBind
by
Chris
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0
Thank you for the explanation! The purple (**gain**) in the control in the right bottom corner but on the y axis is labeled **loss** which …
Comment: Use with_go along with other filters in getBM function
by
RuBBiT0
▴
10
Thank you! I think that makes much sense to me.
Comment: Interpret plot from DiffBind
by
Rory Stark
★
4.9k
Not necessarily. It look to me like there is reconfiguring going on, with some chromatin that was open in the control becoming closed (the …
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