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FlowSOM
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reset
0
votes
2
replies
380
views
FlowSOM library requires igraph but igraph does not install
FlowSOM
written 6 months ago by
Priyanka
• 0
0
votes
2
replies
718
views
FlowSOM error system.file()
FlowSOM
updated 15 months ago by
SamGG
▴ 360 • written 15 months ago by
agus_rizzo
• 0
0
votes
0
replies
515
views
Identifying populations within a FlowSOM tree
FlowSOM
15 months ago
agus_rizzo
• 0
1
vote
3
replies
1.1k
views
FlowSOM Error in flowCore::read.FCS
FlowSOM
updated 15 months ago by
SamGG
▴ 360 • written 15 months ago by
agus_rizzo
• 0
1
vote
1
reply
766
views
FlowSOM with unrelated channels
FlowSOM
cytofWorkflow
updated 23 months ago by
helucro
▴ 70 • written 23 months ago by
Anirban
• 0
0
votes
0
replies
988
views
Job:
Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace
CytoGLMM
FlowSOM
3.3 years ago
hbolouri
• 0
0
votes
2
replies
1.1k
views
FlowSOM dependencies - cytoML and flowutils
FlowSOM
3.4 years ago
jakub.savara
• 0
0
votes
0
replies
1.2k
views
Help with FlowSOM
FlowSOM
3.7 years ago
ismail.ameran
• 0
1
vote
6
replies
2.1k
views
Running FlowSOM in R problem
FlowSOM
updated 4.3 years ago by
sofie.vangassen
▴ 10 • written 4.3 years ago by
Václav
• 0
0
votes
0
replies
1.7k
views
Error from FlowSom to Cytofast
Cytofast
FlowSom
CyTOF
fcs files
4.4 years ago
domenico.somma
• 0
0
votes
1
reply
1.3k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
5.9 years ago
fabrizio.benedetti.82
• 0
0
votes
0
replies
1.7k
views
FlowSOM and ConsensusClusterPlus: reproducibility issue
flowsom
consensusclusterplus
7.9 years ago
Lukas Weber
• 0
0
votes
1
reply
1.3k
views
multiple errors in flowSOM- with readinput and metaClustering_consensus
flowcore
flowsom
8.5 years ago
jeremyeadler
• 0
13 results • Page
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Comment: Differential variance analysis - can i use deseq2
by
Michael Love
43k
VST is valid for working with expression data on a variance stabilized scale, so yes. There are many papers that have used VST and then com…
Answer: Use of limma R package with targeted proteomics for DE analysis
by
Gordon Smyth
52k
It is usual to analyse log normalized values from Olink in limma. Just a straight log transformation should be sufficient. We find that `tr…
Comment: WGCNA
by
pammelala304
• 0
Thank you for your time and effort. I am so grateful! Play game [block blast](https://blockblastpuzzle.io) free.
Comment: Does anyone have the command to download all of the core_nt using blast_db_get()
by
Matthew Thornton
▴ 380
Ok. So I guess the core_nt is over 300Gb compressed. I can do it, but maybe it is better to just use ncbi-tools over the internet and just…
Comment: normalizatino of dna methylation EPIC data
by
user_bioinfo
• 0
yes actually that's why I did, and its all good! thank you for your response
Votes
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: normalizatino of dna methylation EPIC data
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Suggesting changing the "reply-to" field to the mailing list address.
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
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