Bioconductor FlowSom

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655

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FlowSOM

updated 6 months ago by EvangelinePope • 0 • written 6 months ago by marco.klein1 • 0

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954

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FlowSOM

updated 7 months ago by Szabolcs • 0 • written 15 months ago by Priyanka • 0

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967

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FlowSOM

updated 2.0 years ago by SamGG ▴ 360 • written 2.0 years ago by agus_rizzo • 0

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710

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FlowSOM

2.0 years ago agus_rizzo • 0

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FlowSOM

updated 2.0 years ago by SamGG ▴ 360 • written 2.1 years ago by agus_rizzo • 0

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985

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FlowSOM cytofWorkflow

updated 2.7 years ago by helucro ▴ 70 • written 2.7 years ago by Anirban • 0

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flowWorkspace CytoGLMM FlowSOM

4.0 years ago hbolouri • 0

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FlowSOM

4.1 years ago jakub.savara • 0

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FlowSOM

4.4 years ago ismail.ameran • 0

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FlowSOM

updated 5.1 years ago by sofie.vangassen ▴ 10 • written 5.1 years ago by Václav • 0

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Cytofast FlowSom CyTOF fcs files

5.1 years ago domenico.somma • 0

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flowcytometry flowSOM flowSET flowFrame

6.6 years ago fabrizio.benedetti.82 • 0

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flowsom consensusclusterplus

8.7 years ago Lukas Weber • 0

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flowcore flowsom

9.3 years ago jeremyeadler • 0

14 results • Page 1 of 1

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Comment: Question about DESeq2 Design for Paired Treatment Study by ATpoint ★ 5.0k

It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …

Comment: problem reading bam files into nucleR by efoss ▴ 10

I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…

Answer: two questions about limma by Gordon Smyth 53k

Answered here: https://support.bioconductor.org/p/16318/

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Votes

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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