Bioconductor GDCprepare

Showing : GDCprepare • reset

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922

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GDCPrepare GDCDownload

2.1 years ago Manav • 0

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1.6k

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tcgabiolinks gdcprepare differential expression

5.0 years ago fawazfebin ▴ 60

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2.8k

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TCGABiolinks GDCprepare

5.2 years ago vm ▴ 30

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1.7k

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TCGAbiolinks GDCprepare error

updated 5.3 years ago by Tiago C. Silva ▴ 270 • written 5.3 years ago by Talip Zengin ▴ 10

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TCGA GDCprepare

5.7 years ago salvocomplicazioni1 • 0

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tcgabiolinks gdcprepare

updated 5.8 years ago by James W. MacDonald 67k • written 5.8 years ago by ansari.sarabio • 0

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964

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tcgabiolinks illegaloperation gdcprepare

6.8 years ago lisa8191 • 0

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1.8k

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gdcprepare tcgabiolinks treatment_type R data extraction

updated 7.3 years ago by Dario Strbenac ★ 1.5k • written 7.3 years ago by newbie • 0

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R tcgabiolinks gdcprepare

7.4 years ago ugandhar.ch1 • 0

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3.9k

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tcgabiolinks tcga tcgadownload gdcprepare gdc

updated 7.5 years ago by Tiago Chedraoui Silva ▴ 260 • written 7.7 years ago by enigmargs • 0

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2.9k

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tcgabiolinks gdcprepare

8.0 years ago sabarinath.chandrasekharan ▴ 10

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1.3k

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tcgabiolinks gdcprepare

updated 8.1 years ago by Tiago C. Silva ▴ 270 • written 8.1 years ago by Mariana Boroni ▴ 10

12 results • Page 1 of 1

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Comment: ChAMP - obtaining beta values using EPICv2 annotation by Aurora • 0

Have you solved it? I have the same problem as you

Comment: Unable to install any Bioconductor package with new R 4.4.1 - path nor writable by gabry.scata ▴ 10

Hi James, and thank you so much for your quick reply! That's great to know that I have installed successfully the packages i wanted. What …

Comment: pathview error "negative length vectors are not allowed by Evan • 0

Same for N-glycan metabolism-- fails with `same.layer = TRUE` , smudges and comet-like shading with `same.layer = FALSE`, crowded web with …

Comment: How to conduct maSigPro analysis with only one condition? by James W. MacDonald 67k

Technically it's fitting an analysis of deviance (ANODEV) test, but the principle is the same - deviance, like the likelihood, measures goo…

Comment: How to conduct maSigPro analysis with only one condition? by James W. MacDonald 67k

Yeah, it's fine. What `maSigPro` does in this case is to reformulate the data. Your design has columns that are not useful, and `maSigPro` …

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Comment: How to conduct maSigPro analysis with only one condition?

Comment: Spectra and PSMatch- trouble in reducePSMs, joinSpectraData, or countIdentificat

Answer: How to conduct maSigPro analysis with only one condition?

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