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GDCPrepare
•
reset
0
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1.9k
views
Error in GDCDownload and GDCPrepare for TCGA-PAAD Dataset
GDCPrepare
GDCDownload
3.5 years ago
Manav
• 0
0
votes
0
replies
2.1k
views
GDCprepare error in TCGAbiolinks
tcgabiolinks
gdcprepare
differential expression
6.4 years ago
fawazfebin
▴ 60
4
votes
5
replies
3.6k
views
GDCprepare - error
TCGABiolinks
GDCprepare
6.6 years ago
vm
▴ 30
2
votes
2
replies
2.1k
views
TCGAbiolinks GDCprepare error
TCGAbiolinks
GDCprepare
error
updated 6.6 years ago by
Tiago C. Silva
▴ 270 • written 6.6 years ago by
Talip
▴ 10
1
vote
5
replies
2.8k
views
Issue with TCGAbiolinks package.
TCGA
GDCprepare
7.0 years ago
salvocomplicazioni1
• 0
0
votes
2
replies
3.0k
views
GDCprepare stop working for some unknown reason
tcgabiolinks
gdcprepare
updated 7.2 years ago by
James W. MacDonald
68k • written 7.2 years ago by
ansari.sarabio
• 0
0
votes
0
replies
1.3k
views
Reasoning for illegal operation
tcgabiolinks
illegaloperation
gdcprepare
8.2 years ago
lisa8191
• 0
0
votes
1
reply
2.6k
views
How to get treatment information with TCGAbiolinks?
gdcprepare
tcgabiolinks
treatment_type
R
data extraction
updated 8.7 years ago by
Dario Strbenac
★ 1.6k • written 8.7 years ago by
newbie
• 0
0
votes
3
replies
1.9k
views
TCGA controlled data
R
tcgabiolinks
gdcprepare
8.8 years ago
ugandhar.ch1
• 0
0
votes
2
replies
5.1k
views
Extract gene expression values from GDCprepare object
tcgabiolinks
tcga
tcgadownload
gdcprepare
gdc
updated 8.9 years ago by
Tiago Chedraoui Silva
▴ 260 • written 9.1 years ago by
enigmargs
• 0
0
votes
8
replies
3.6k
views
TCGAbiolinks GDCprepare fails to connect to Biomart web server
tcgabiolinks
gdcprepare
9.4 years ago
sabarinath.chandrasekharan
▴ 10
0
votes
1
reply
1.6k
views
Error during GDCprepare
tcgabiolinks
gdcprepare
updated 9.5 years ago by
Tiago C. Silva
▴ 270 • written 9.5 years ago by
Mariana Boroni
▴ 10
12 results • Page
1 of 1
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Comment: Question on processing compound protein groups in limpa
by
JKim
• 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa
by
Gordon Smyth
53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
Votes
Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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chirag.parsania
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Michael Love
43k
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