Bioconductor GSE

Showing : GSE • reset

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2.5k

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geoquery GSE

7.4 years ago mahm ▴ 20

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4.0k

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gene expression geoquery GSE bioconductor microarray

updated 7.4 years ago by Sean Davis 21k • written 7.4 years ago by mahm ▴ 20

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1.9k

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lumi microarray GSE

updated 8.0 years ago by Gordon Smyth 53k • written 8.0 years ago by mkd12 • 0

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2.0k

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microarray GSE

8.2 years ago Salvo88 ▴ 20

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2.0k

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GSE subsetting microarray

updated 8.3 years ago by Axel Klenk ★ 1.1k • written 8.3 years ago by A ▴ 60

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2.1k

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geoquery error message GEOquery GSE GEO

8.4 years ago Barah ▴ 20

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2.3k

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GSE soft files GEO data

10.3 years ago sz • 0

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1.7k

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geoquery GSE identical row.names

updated 11.3 years ago by Sean Davis 21k • written 11.3 years ago by PyPer ▴ 20

8 results • Page 1 of 1

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Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0

Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…

Comment: DiffBind plot.profile error by a2sahaaaq2c • 0

To resolve technical errors like installation failures or login issues, first ensure your device allows in the security settings and that…

Comment: soGGi error by shepherl 4.3k

We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…

Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k

No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.

Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0

In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …

Votes

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

C: Why limma, edgeR, and DESeq did not implement fold change moderation first?

Comment: using limma trend workflow in CAMERA

C: z-score with DESeq2?

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Popular Question to Guido Hooiveld ★ 4.1k