Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
subsetting
•
reset
1
vote
2
replies
2.2k
views
object of type 'externalptr' is not subsettable in R4.0 - with COM Object
r4.0
ComponentObjectModel
subsetting
2.6 years ago • updated 2.5 years ago
Duy Duc
• 0
0
votes
5
replies
4.2k
views
Grange object subsetting using seqnames
Seqnames
makeGRangesFromDataFrame
GRanges
Subsetting
GenomicRanges
3.9 years ago
rtrivedi1
▴ 10
0
votes
2
replies
1.6k
views
DataFrame matrix subsetting
DataFrame
subsetting
S4Vectors
updated 6.3 years ago by
Hervé Pagès
16k • written 6.4 years ago by
felix.ernst
• 0
4
votes
7
replies
6.0k
views
removing rows from SingleCellExperiment container
sce
singlecellexperiment
scRNAseq
subsetting
updated 6.4 years ago by
Aaron Lun
★ 28k • written 6.4 years ago by
TJ
• 0
1
vote
1
reply
1.3k
views
Subsetting GRanges objext
GRanges
subsetting
updated 6.8 years ago by
James W. MacDonald
68k • written 6.8 years ago by
lalchungnungabt17
• 0
2
votes
5
replies
2.1k
views
rlog, lfcShrink and vst on gene subset
deseq2
subsetting
plot
updated 6.9 years ago by
Michael Love
43k • written 7.0 years ago by
giulia.pasquesi
▴ 10
1
vote
2
replies
1.7k
views
Subsetting GSE data with information from two different slots
GSE
subsetting
microarray
updated 7.5 years ago by
Axel Klenk
★ 1.1k • written 7.5 years ago by
A
▴ 60
3
votes
4
replies
7.1k
views
Subset GRanges object into new object
R
genomicranges
subsetting
7.6 years ago
jhanks1981
• 0
4
votes
3
replies
4.8k
views
subsetting GRanges object based on gene IDs
genomicranges
genomicfeatures
granges
subsetting
7.7 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
2.7k
views
Subsetting/subsequencing AAStringSet containing sequences of unequal length
biostrings
aastringset
subsetting
updated 8.1 years ago by
Hervé Pagès
16k • written 8.1 years ago by
bri.isabella
• 0
0
votes
1
reply
1.4k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR
htqpcr
subsetting
updated 8.3 years ago by
henrik.seidel
▴ 40 • written 8.5 years ago by
Guido Hooiveld
★ 4.1k
0
votes
0
replies
1.2k
views
Subsetting and Transforming
subsetting
gate
flowcore
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
smajor
• 0
1
vote
2
replies
1.2k
views
VariantAnnotation CollapsedVCF trouble
variantannotation
subsetting
8.6 years ago
Fabian Grammes
▴ 20
1
vote
2
replies
2.3k
views
Subsetting GRanges based on metadata
GRanges
metadata
subsetting
updated 8.8 years ago by
Michael Lawrence
★ 11k • written 8.8 years ago by
mdeea123
▴ 10
3
votes
7
replies
7.5k
views
edgeR subsetting DGEList by column/sample
edger
subsetting
dgelist
updated 8.8 years ago by
Gordon Smyth
52k • written 8.8 years ago by
mnaymik
▴ 10
4
votes
4
replies
2.1k
views
Limma Elist subsetting
microarray
limma
subsetting
9.0 years ago
arfranco
▴ 130
4
votes
2
replies
1.8k
views
drop levels in eSet pData
subsetting
eSet
9.2 years ago
Shamim Sarhadi
▴ 20
0
votes
1
reply
1.5k
views
Inconsistent Subseting using norm2Filter in FlowCore
flowcore
gate
subsetting
filter
updated 9.7 years ago by
Jiang, Mike
★ 1.3k • written 9.7 years ago by
peterfoster
▴ 20
3
votes
2
replies
1.7k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 9.7 years ago by
James W. MacDonald
68k • written 9.7 years ago by
arado1
• 0
2
votes
1
reply
1.5k
views
naiveRandRUV Error When k is 1
RUVNormalize
Subsetting
updated 9.9 years ago by
laurent.jacob
▴ 10 • written 10.0 years ago by
Dario Strbenac
★ 1.6k
20 results • Page
1 of 1
Recent ...
Replies
Comment: parameters of filterByExpr
by
caroline.zanchi
▴ 10
Ah yes sorry :) But then I still do not understand why is it that on the plot I attached, the gene definitely has non-0 counts in less than…
Answer: Typo in the help of lmFit()
by
Gordon Smyth
52k
Thanks for the heads-up. > The _Details_ in the documentation of lmFit() still says that the default correlation is 0.75 Yes, you're righ…
Comment: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
by
caroline.zanchi
▴ 10
Thank you ! ![enter image description here][1] In the end I did ```r rn2 <- select(org.Dm.eg.db, row.names(cent_expr_matrix), "GENENAME"…
Answer: Memory issue while using "quickcluster" and "computeSumFactors" functions on sin
by
James W. MacDonald
68k
The obvious solution is to use cloud computing, which is likely cheaper than getting more RAM for your computer.
Answer: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
by
James W. MacDonald
68k
``` library(org.Dm.eg.db) rn <- select(org.Dm.eg.db, row.names(cent_expr_matrix), "SYMBOL","FLYBASE") ## ensure no NA values get propaga…
Votes
Answer: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
Answer: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
Deseq2 DE analysis of host-pathogen samples (model separately or jointly?)
Comment: Check removeBatchEffect effectiveness
Answer: Check removeBatchEffect effectiveness
Awards
• All
Popular Question
to
shepherl
4.1k
Popular Question
to
AMgroup
• 0
Popular Question
to
favorov
• 0
Popular Question
to
bhanu.chandra1
• 0
Popular Question
to
James W. MacDonald
68k
Locations
• All
Germany,
3 minutes ago
Italy,
4 minutes ago
Spain,
24 minutes ago
United States,
55 minutes ago
Pakistan,
1 hour ago
Traffic: 2347 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6