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Showing :
subsetting
•
reset
1
vote
2
replies
1.1k
views
object of type 'externalptr' is not subsettable in R4.0 - with COM Object
r4.0
ComponentObjectModel
subsetting
13 months ago • updated 12 months ago
Duy Duc
• 0
0
votes
5
replies
1.9k
views
Grange object subsetting using seqnames
Seqnames
makeGRangesFromDataFrame
GRanges
Subsetting
GenomicRanges
2.4 years ago
rtrivedi1
▴ 10
0
votes
2
replies
1.1k
views
DataFrame matrix subsetting
DataFrame
subsetting
S4Vectors
updated 4.9 years ago by
Hervé Pagès
16k • written 4.9 years ago by
felix.ernst
• 0
4
votes
7
replies
3.8k
views
removing rows from SingleCellExperiment container
sce
singlecellexperiment
scRNAseq
subsetting
updated 4.9 years ago by
Aaron Lun
★ 28k • written 4.9 years ago by
TJ
• 0
1
vote
1
reply
821
views
Subsetting GRanges objext
GRanges
subsetting
updated 5.3 years ago by
James W. MacDonald
64k • written 5.3 years ago by
lalchungnungabt17
• 0
2
votes
5
replies
1.5k
views
rlog, lfcShrink and vst on gene subset
deseq2
subsetting
plot
updated 5.5 years ago by
Michael Love
41k • written 5.5 years ago by
giulia.pasquesi
▴ 10
1
vote
2
replies
1.2k
views
Subsetting GSE data with information from two different slots
GSE
subsetting
microarray
updated 6.1 years ago by
Axel Klenk
▴ 990 • written 6.1 years ago by
A
▴ 40
3
votes
4
replies
5.6k
views
Subset GRanges object into new object
R
genomicranges
subsetting
6.1 years ago
jhanks1981
• 0
4
votes
3
replies
3.4k
views
subsetting GRanges object based on gene IDs
genomicranges
genomicfeatures
granges
subsetting
6.2 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
1.8k
views
Subsetting/subsequencing AAStringSet containing sequences of unequal length
biostrings
aastringset
subsetting
updated 6.6 years ago by
Hervé Pagès
16k • written 6.6 years ago by
bri.isabella
• 0
0
votes
1
reply
1.1k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR
htqpcr
subsetting
updated 6.9 years ago by
henrik.seidel
▴ 40 • written 7.0 years ago by
Guido Hooiveld
★ 3.8k
0
votes
0
replies
810
views
Subsetting and Transforming
subsetting
gate
flowcore
updated 6.9 years ago by
Martin Morgan
25k • written 6.9 years ago by
smajor
• 0
1
vote
2
replies
872
views
VariantAnnotation CollapsedVCF trouble
variantannotation
subsetting
7.2 years ago
Fabian Grammes
▴ 20
1
vote
2
replies
1.9k
views
Subsetting GRanges based on metadata
GRanges
metadata
subsetting
updated 7.3 years ago by
Michael Lawrence
11k • written 7.3 years ago by
mdeea123
▴ 10
3
votes
7
replies
6.2k
views
edgeR subsetting DGEList by column/sample
edger
subsetting
dgelist
updated 7.4 years ago by
Gordon Smyth
48k • written 7.4 years ago by
mnaymik
▴ 10
4
votes
4
replies
1.5k
views
Limma Elist subsetting
microarray
limma
subsetting
7.5 years ago
arfranco
▴ 130
4
votes
2
replies
1.4k
views
drop levels in eSet pData
subsetting
eSet
7.7 years ago
Shamim Sarhadi
▴ 20
0
votes
1
reply
1.2k
views
Inconsistent Subseting using norm2Filter in FlowCore
flowcore
gate
subsetting
filter
updated 8.2 years ago by
Jiang, Mike
★ 1.3k • written 8.2 years ago by
peterfoster
▴ 20
3
votes
2
replies
1.2k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 8.3 years ago by
James W. MacDonald
64k • written 8.3 years ago by
arado1
• 0
2
votes
1
reply
1.1k
views
naiveRandRUV Error When k is 1
RUVNormalize
Subsetting
updated 8.4 years ago by
laurent.jacob
▴ 10 • written 8.5 years ago by
Dario Strbenac
★ 1.5k
20 results • Page
1 of 1
Recent ...
Replies
Comment: GOslim missing GO term
by
amanda
• 0
Thank you for the advice and many thanks! It is WGCNA analysis. I will try your method today and see if there are some consistencies.
Comment: GOslim missing GO term
by
James W. MacDonald
64k
Is this a WGCNA analysis (multiple co-expression clusters sounds like WGCNA)? If so, none of that is inferential or easily interpreted. It …
Comment: GOslim missing GO term
by
amanda
• 0
For each group, I generated multiple co-expression clusters, and within each cluster, cluster PC1 was correlated with PC1 of multiple clini…
Comment: GOslim missing GO term
by
James W. MacDonald
64k
What do you mean by 'enriched with ... GO terms from their correlations with clinical traits'? Are you doing a GO hypergeometric or somethi…
Comment: GOslim missing GO term
by
amanda
• 0
I have multiple groups to compare with, and each enriched with hundreds of GO terms from their correlations with clinical traits (top1 pval…
Votes
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: limma::voom vs edgeR::voomLmFit - when to use?
Answer: limma::voom vs edgeR::voomLmFit - when to use?
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James W. MacDonald
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Assa Yeroslaviz
★ 1.5k
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Gordon Smyth
48k
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▴ 70
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