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Daniel E. Weeks
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updated 7 months ago by
Robert Ivanek
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written 7 months ago by
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written 6 months ago by
yujin
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written 3.0 years ago by
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updated 12 months ago by
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6 months ago
yujin
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Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴
70
Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.
Comment: Extremely small p-values using Limma for proteomic data
by
Robert Castelo
★
3.3k
From the point of view of visualization, I find handy the fact that raw p-values give more resolution than adjusted ones, which allows one …
Comment: deseq2 results
by
ATpoint
★
4.1k
> the results are not satisfactory to me
Well, what is your question? The DESeq2 vignette covers how to do analysis, and some diagnostics…
Comment: Extremely small p-values using Limma for proteomic data
by
ATpoint
★
4.1k
It's not an implementation problem I am discussing (it's trivial obviously) -- more that for most purposes the y-axis metric should be the …
Comment: Extremely small p-values using Limma for proteomic data
by
Robert Castelo
★
3.3k
For visualization purposes you can draw an horizontal line at the p-value cutoff that meets the experiment-wide FDR cutoff. For instance, i…
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