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Graphviz
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[SOLVED] Problem with the installation of Rgraphviz
Graphviz
Rgraphviz
2.4 years ago
c.bell.lu
• 0
4
votes
3
replies
2.0k
views
Pathview: Exporting non native KEGG pathway to PNG
pathview
bioconductor
graphics
graphviz
Pathview
updated 7.6 years ago by
dondelelcaro
▴ 10 • written 7.7 years ago by
guillermo.marco
▴ 30
0
votes
2
replies
1.4k
views
Pathview: Exporting non native KEGG pathway ignoring same.layer argument
Pathview
rgraphviz
graphviz
KEGG
updated 7.7 years ago by
Luo Weijun
★ 1.6k • written 7.7 years ago by
guillermo.marco
▴ 30
0
votes
0
replies
1.9k
views
Read Graphviz file .dot in R
r
rstudio
rgraphviz
graphviz
.dot
7.9 years ago
pleaseteachmehowtodoit
• 0
1
vote
1
reply
1.2k
views
embed url in pathview images
pathview
r
pdf
kegg
graphviz
updated 8.4 years ago by
Luo Weijun
★ 1.6k • written 8.4 years ago by
firstdayonthejob2003
• 0
3
votes
5
replies
2.3k
views
Explanation of warning output of pathview regarding visualization of a KEGG pathway with Graphviz format
pathview
clusterProfiler
KEGGpath
visualization
Graphviz
updated 8.4 years ago by
Luo Weijun
★ 1.6k • written 8.5 years ago by
svlachavas
▴ 830
0
votes
0
replies
1.2k
views
Rgraphviz: nodes with multiple colors
rgraphviz
graphviz
R
8.8 years ago
oliverfrings
• 0
7 results • Page
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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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