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[SOLVED] Problem with the installation of Rgraphviz
Graphviz
Rgraphviz
2.6 years ago
c.bell.lu
• 0
4
votes
3
replies
2.2k
views
Pathview: Exporting non native KEGG pathway to PNG
pathview
bioconductor
graphics
graphviz
Pathview
updated 7.8 years ago by
dondelelcaro
▴ 10 • written 7.9 years ago by
guillermo.marco
▴ 30
0
votes
2
replies
1.5k
views
Pathview: Exporting non native KEGG pathway ignoring same.layer argument
Pathview
rgraphviz
graphviz
KEGG
updated 7.9 years ago by
Luo Weijun
★ 1.6k • written 7.9 years ago by
guillermo.marco
▴ 30
0
votes
0
replies
2.0k
views
Read Graphviz file .dot in R
r
rstudio
rgraphviz
graphviz
.dot
8.1 years ago
pleaseteachmehowtodoit
• 0
1
vote
1
reply
1.3k
views
embed url in pathview images
pathview
r
pdf
kegg
graphviz
updated 8.6 years ago by
Luo Weijun
★ 1.6k • written 8.6 years ago by
firstdayonthejob2003
• 0
3
votes
5
replies
2.4k
views
Explanation of warning output of pathview regarding visualization of a KEGG pathway with Graphviz format
pathview
clusterProfiler
KEGGpath
visualization
Graphviz
updated 8.7 years ago by
Luo Weijun
★ 1.6k • written 8.7 years ago by
svlachavas
▴ 830
0
votes
0
replies
1.3k
views
Rgraphviz: nodes with multiple colors
rgraphviz
graphviz
R
9.1 years ago
oliverfrings
• 0
7 results • Page
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Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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