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HiCDCPlus
•
reset
0
votes
0
replies
349
views
HiCDCPlus differential interaction error
HiCDCPlus
13 months ago
Irene
• 0
0
votes
2
replies
598
views
Java error while running HiCDC overview code
JuicerTools
HiC
HiCDCPlus
Java
Juicer
written 15 months ago by
IsMM
• 0
0
votes
1
reply
719
views
HiCDCPlus glm.fit error
HiCDCPlus
updated 21 months ago by
merve.sahn
• 0 • written 22 months ago by
ehamrud
• 0
0
votes
1
reply
654
views
HiCDCPlus extract_hic_eigenvectors() only works with larger bin sizes (> =250kb )?
HiCDCPlus
updated 21 months ago by
merve.sahn
• 0 • written 24 months ago by
mlin18
• 0
0
votes
1
reply
1.2k
views
Error in loadFUN(x, seqname, ranges) : trying to load regions beyond the boundaries of non-circular sequence "chr2"
HiCDCPlus
BSgenome.Hsapiens.UCSC.hg38
updated 21 months ago by
merve.sahn
• 0 • written 2.3 years ago by
Yue
• 0
0
votes
1
reply
721
views
HiCDCPlus `construct_features` incompatible with BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 annotation
HiC-DC+
HiCDCPlus
updated 21 months ago by
merve.sahn
• 0 • written 2.3 years ago by
Yue
• 0
0
votes
2
replies
902
views
Could I use HiCDCPlus in plant genome?
HiC-DC+
HiCDCPlus
updated 2.6 years ago by
scott
• 0 • written 3.0 years ago by
1037144675
• 0
0
votes
1
reply
995
views
HiCDCPlus with NO replicates
hicdcdiff
HiCDCPlus
updated 2.9 years ago by
merve.sahn
• 0 • written 3.2 years ago by
ta_awwad
▴ 10
0
votes
2
replies
1.5k
views
HicDCplus error, R_Reprotect: only 4 protected items, can't reprotect index -1 (from gi_list_write)
hicd
HiCDCPlus
updated 2.0 years ago by
Michelle
• 0 • written 3.3 years ago by
gamma.jian
▴ 10
0
votes
1
reply
867
views
HiC-DC+ Distance / Model Fitting error when running HiCDCPlus()
HiC-DC+
HiCDCPlus
updated 2.9 years ago by
merve.sahn
• 0 • written 3.6 years ago by
Hannah
• 0
3
votes
7
replies
2.6k
views
Which version of R to use for "HiCDCPlus" "HiC-DC+"
HiC-DC+
HiCDCPlus
BiocParallel
updated 4.1 years ago by
koushik
• 0 • written 4.4 years ago by
Tay
▴ 10
0
votes
3
replies
1.1k
views
HiCDCPlus / HiC-DC+ is not found
HiCDCPlus
HiC-DC+
HiCcompare
HiC
updated 2.9 years ago by
merve.sahn
• 0 • written 4.4 years ago by
mtS
• 0
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Comment: Annotation package for Manduca sexta
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Thank you!
Comment: Improving performance of edgeR and limma while adjusting for multiple confounder
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If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…
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Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …
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We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…
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It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…
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Looking for equivalent EPIC chip v1 vs. v2 annotation variables
Properly constructing a hypergeometric test
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Comment: Error in retrieving clinical data
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