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IGV
•
reset
2
votes
5
replies
3.7k
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A parser for Tiled Data File (TDF) format?
file format
parser
IO
TDF
IGV
8.2 years ago
Henrik Bengtsson
★ 2.4k
4
votes
3
replies
2.8k
views
Is there an R package providing an R API for IGV / igvtools out there?
package
IGV
updated 8.2 years ago by
Paul Shannon
▴ 470 • written 8.2 years ago by
Henrik Bengtsson
★ 2.4k
0
votes
0
replies
1.4k
views
IGV like plots with GViz
gviz
R
IGV
6.8 years ago
Deepak Tanwar
▴ 10
0
votes
0
replies
739
views
Gviz colour reads by Read Group in AlignmentTrack
gviz
igv
5.0 years ago
ido.idobar
• 0
0
votes
1
reply
712
views
reload IGV exported feature to Gviz
gviz
igv
5.9 years ago
ta_awwad
▴ 10
0
votes
0
replies
167
views
Unclear exon-exon connection after RSubjunc() usage
IGV
Rsubjunc
Rsubread
11 weeks ago
thomas.heigl.ibk
• 0
6 results • Page
1 of 1
Recent ...
Replies
Comment: Create protein sequences including variants from a VCF file
by
Yun
• 0
This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object
Comment: Can log2cpm be used for proteomics data normalization?
by
Daniel
• 0
Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
Thanks again Guido, I will try to run the script you have suggested and see if I can install the package. Yes, I have seen this message a…
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Guido Hooiveld
★ 4.0k
FWIW: based on [previous posts][1] it is suggested to install like this: install.packages(pkgs="./org.Vdahliae.eg.db", repos=NULL, typ…
Votes
Comment: How to correctly adjust for gender in edgeR
Create protein sequences including variants from a VCF file
A: DEXSeq design formula
Answer: SGSeq: moving toward diffex from SGSeq analysis
Answer: How to design DEXSeq formula for multiple variables
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